RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FAM153BP0C7A2 387 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 ACADMP11310 421 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CYP2A6P11509 494 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CTPS1P17812 591 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 C5AR1P21730 350 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 ELK3P41970 407 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 MAGEA4P43358 317 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 NEK3P51956 506 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CXADRP78310 365 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CRADDP78560 199 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 RHDQ02161 417 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 LY6DQ14210 128 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 FAM153CQ494X1 144 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 MSS51Q4VC12 460 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CCDC38Q502W7 563 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 HP1BP3Q5SSJ5 553 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CERCAMQ5T4B2 595 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 FBXL19Q6PCT2 694 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 KIAA1324Q6UXG2 1013 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 PARS2Q7L3T8 475 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 GLT6D1Q7Z4J2 308 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CCNJLQ8IV13 435 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 ANKMY2Q8IV38 441 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 FBXO36Q8NEA4 188 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 GANCQ8TET4 914 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 AENQ8WTP8 325 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 PYROXD1Q8WU10 500 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 HMGB4Q8WW32 186 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 PIH1D2Q8WWB5 315 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 SPOCK2Q92563 424 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CFAP36Q96G28 342 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 TTC25Q96NG3 672 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 NAT9Q9BTE0 207 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 ZDHHC5Q9C0B5 715 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 IL21RQ9HBE5 538 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 BCCIPQ9P287 314 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 SARDHQ9UL12 918 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 SCML1Q9UN30 329 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 CHMP2BQ9UQN3 213 aa12.05□□□□□ -0.48
SHKBP1-213ENST00000597325 USP9YO00507 2555 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 A0A0J9YYE9 177 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 MID1O15344 667 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 BANF1O75531 89 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TRBC1P01850 177 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ALPIP09923 528 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PIRTP0C851 137 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ADRB3P13945 408 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PGAM1P18669 254 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ADRA1DP25100 572 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 SLC8A1P32418 973 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ABL2P42684 1182 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 SUOXP51687 545 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 COPAP53621 1224 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PMS2P54278 862 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PDE1BQ01064 536 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 SEMG2Q02383 582 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ZBTB16Q05516 673 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ELP6Q0PNE2 266 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TAF1AQ15573 450 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 UGP2Q16851 508 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 LRRC73Q5JTD7 316 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PCID2Q5JVF3 399 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 SLC36A4Q6YBV0 504 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ERN2Q76MJ5 926 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 NLRP9Q7RTR0 991 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ZSWIM9Q86XI8 627 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TMPRSS6Q8IU80 811 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 RELL1Q8IUW5 271 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PALM2Q8IXS6 379 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 MPP5Q8N3R9 675 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 BRSK1Q8TDC3 778 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TTC9Q92623 222 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 CAVIN3Q969G5 261 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 RAB7BQ96AH8 199 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ARRDC3Q96B67 414 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 SIPA1Q96FS4 1042 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 RANBP9Q96S59 729 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 CDC6Q99741 560 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 EBNA1BP2Q99848 306 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 OMDQ99983 421 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 HDAC8Q9BY41 377 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 GPR63Q9BZJ6 419 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 PABPC3Q9H361 631 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 MAGEE1Q9HCI5 957 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ZC3H7BQ9UGR2 993 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 SOX13Q9UN79 622 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 ZNF711Q9Y462 761 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TCAF1Q9Y4C2 921 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 TEX264Q9Y6I9 313 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 AHCTF1Q8WYP5 2266 aa12.04□□□□□ -0.48
SHKBP1-213ENST00000597325 IGHV1OR15-9A0A0B4J2B8 117 aa12.03□□□□□ -0.48
SHKBP1-213ENST00000597325 C1orf232A0A0U1RR37 186 aa12.03□□□□□ -0.48
SHKBP1-213ENST00000597325 MAGEB16A2A368 324 aa12.03□□□□□ -0.48
SHKBP1-213ENST00000597325 C2orf81A6NN90 581 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms