RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 HYOU1Q9Y4L1 999 aa17.83■□□□□ 0.44
CHMP2A-203ENST00000597209 ZW10O43264 779 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 AK4P27144 223 aaPredicted RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 NOP2P46087 812 aaKnown RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 B4GALNT1Q00973 533 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 ZFP36L1Q07352 338 aaKnown RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 PYCR3Q53H96 274 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 SOWAHCQ53LP3 525 aaPredicted RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 B3GNT8Q7Z7M8 397 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 CCDC97Q96F63 343 aaPredicted RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 OR2M4Q96R27 311 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 FAM83DQ9H4H8 585 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 MAGEE1Q9HCI5 957 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 LUC7LQ9NQ29 371 aaKnown RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 CNOT6Q9ULM6 557 aaKnown RBP17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 TMEM98Q9Y2Y6 226 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 PCDHA13Q9Y5I0 950 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 ST14Q9Y5Y6 855 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 NBEAQ8NFP9 2946 aa17.82■□□□□ 0.44
CHMP2A-203ENST00000597209 CACNA1GO43497 2377 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 ITGA2BP08514 1039 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 TNNT1P13805 278 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 CYLC1P35663 651 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 GPR3P46089 330 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 UCNP55089 124 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 DYNLT1P63172 113 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 CDK18Q07002 472 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 PRKD1Q15139 912 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 SPA17Q15506 151 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 TFDP3Q5H9I0 405 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 C11orf63Q6NUN7 778 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 DOK6Q6PKX4 331 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 SPOCD1Q6ZMY3 1216 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 RAB11FIP2Q7L804 512 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 KATNAL2Q8IYT4 538 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 NAGSQ8N159 534 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 Q8N9G6 341 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 KCNE4Q8WWG9 221 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 TMEM159Q96B96 161 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 MRFAP1L1Q96HT8 127 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 CALR3Q96L12 384 aaKnown RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 TEKT5Q96M29 485 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 AGAP3Q96P47 875 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 SRPK1Q96SB4 655 aaKnown RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 CEP41Q9BYV8 373 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 SUDS3Q9H7L9 328 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 ZFYVE1Q9HBF4 777 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 GLOD4Q9HC38 313 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 EPB41L5Q9HCM4 733 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 RAD18Q9NS91 495 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 NFKBIL1Q9UBC1 381 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 ARHGEF17Q96PE2 2063 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-203ENST00000597209 PLD2O14939 933 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 INPP4BO15327 924 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 MTSS1O43312 755 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 B4GAT1O43505 415 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 CST8O60676 142 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 DNAJC6O75061 913 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 TNFSF15O95150 251 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 ZRANB2O95218 330 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 ECEL1O95672 775 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 HOXB3P14651 431 aaPredicted RBP17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 FECHP22830 423 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 PTPN3P26045 913 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 ACTR1BP42025 376 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 MAZP56270 477 aaKnown RBP17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 ACTR1AP61163 376 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 BROXQ5VW32 411 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 SLC30A9Q6PML9 568 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 GALNT13Q8IUC8 556 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 RCOR2Q8IZ40 523 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 FBXO39Q8N4B4 442 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 TFB1MQ8WVM0 346 aaKnown RBP17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 PANX2Q96RD6 677 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 RMI1Q9H9A7 625 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 SEPT10Q9P0V9 454 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 PCDHGA7Q9Y5G6 932 aa17.8■□□□□ 0.44
CHMP2A-203ENST00000597209 PMS2P1A4D2B8 440 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 RHPN2P1A8MT19 583 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 FADS2P1A8MWK0 482 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 UGT1A5P35504 534 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 ZNF75DP51815 510 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 DCDC1P59894 354 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 SQSTM1Q13501 440 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 GALNT3Q14435 633 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 LYSMD3Q7Z3D4 306 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 TRIM74Q86UV6 250 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 SLITRK4Q8IW52 837 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 EID2BQ96D98 161 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 RBM41Q96IZ5 413 aaKnown RBP17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 UBL7Q96S82 380 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 FOXP3Q9BZS1 431 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 SAE1Q9UBE0 346 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 ATXN7L1Q9ULK2 861 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 PLEKHM1Q9Y4G2 1056 aa17.79■□□□□ 0.44
CHMP2A-203ENST00000597209 hCG_1818297A0A087WSY0 165 aa17.78■□□□□ 0.44
CHMP2A-203ENST00000597209 TEX51A0A1B0GUA7 166 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms