RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 TMPRSS12Q86WS5 348 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 ANKMY2Q8IV38 441 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 DNAAF3Q8N9W5 541 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 LPCAT1Q8NF37 534 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 OR2T3Q8NH03 318 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 BAHD1Q8TBE0 780 aaPredicted RBP9.45□□□□□ -0.9
TRIM28-208ENST00000597172 RHBDD1Q8TEB9 315 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 TTC9Q92623 222 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
TRIM28-208ENST00000597172 FSD1LQ9BXM9 530 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 OSBPL1AQ9BXW6 950 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 ADGRE3Q9BY15 652 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 MKRN2Q9H000 416 aaKnown RBP9.45□□□□□ -0.9
TRIM28-208ENST00000597172 PLAC1Q9HBJ0 212 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 SAYSD1Q9NPB0 183 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 SYBUQ9NX95 663 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 BFARQ9NZS9 450 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 DKK3Q9UBP4 350 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 PHTF1Q9UMS5 762 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 RPL26L1Q9UNX3 145 aaKnown RBP9.45□□□□□ -0.9
TRIM28-208ENST00000597172 SPO11Q9Y5K1 396 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 BOD1L1Q8NFC6 3051 aa9.45□□□□□ -0.9
TRIM28-208ENST00000597172 A0A0J9YYE9 177 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 CCDC151A5D8V7 595 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 C16orf96A6NNT2 1141 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 AP3B1O00203 1094 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 KPNA3O00505 521 aaPredicted RBP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 AURKAO14965 403 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 LDB2O43679 373 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 IL1BP01584 269 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 TRBC1P01850 177 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 ALPIP09923 528 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 HOXB2P14652 356 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 JUPP14923 745 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 CA4P22748 312 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 HNF1BP35680 557 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 ABL2P42684 1182 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 RPS14P62263 151 aaKnown RBP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 KYNUQ16719 465 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 UGP2Q16851 508 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 CCDC38Q502W7 563 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 EOGTQ5NDL2 527 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 BEND6Q5SZJ8 279 aaPredicted RBP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 DENND2CQ68D51 928 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 EMBQ6PCB8 327 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 BRAT1Q6PJG6 821 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 DHRS13Q6UX07 377 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 CENPUQ71F23 418 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 PARS2Q7L3T8 475 aaKnown RBP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 TMC3Q7Z5M5 1100 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 TMPRSS6Q8IU80 811 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 ZBED8Q8IZ13 594 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 AADATQ8N5Z0 425 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 FBXO36Q8NEA4 188 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 BRSK1Q8TDC3 778 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 EID2BQ96D98 161 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 SCRN2Q96FV2 425 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 C9orf72Q96LT7 481 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 EBNA1BP2Q99848 306 aaKnown RBP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 KIFC1Q9BW19 673 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 ZDHHC5Q9C0B5 715 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 PHACTR1Q9C0D0 580 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 TSPYL1Q9H0U9 437 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 SLC6A17Q9H1V8 727 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 EPB41L4BQ9H329 900 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 MAGEE1Q9HCI5 957 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM28-208ENST00000597172 KCTD3Q9Y597 815 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 PLXND1Q9Y4D7 1925 aa9.44□□□□□ -0.9
TRIM28-208ENST00000597172 A0A1W2PQ67 120 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 MAGEB16A2A368 324 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 MROH6A6NGR9 719 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 MID1O15344 667 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 SPINT1O43278 529 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 CPP00450 1065 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 MYF5P13349 255 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 ADRA1DP25100 572 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 ITGB7P26010 798 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 DRD3P35462 400 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 GRIA4P48058 902 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 PSMD8P48556 350 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 PMS2P54278 862 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 GPX6P59796 221 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 POLR2LP62875 67 aaKnown RBP9.43□□□□□ -0.9
TRIM28-208ENST00000597172 CNTN1Q12860 1018 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 NFATC3Q12968 1075 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 GRIK2Q13002 908 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 PTPRCAPQ14761 206 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 STARD3Q14849 445 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 POU6F1Q14863 301 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 SLMAPQ14BN4 828 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 CST6Q15828 149 aa9.43□□□□□ -0.9
TRIM28-208ENST00000597172 UAP1Q16222 522 aaPredicted RBP9.43□□□□□ -0.9
TRIM28-208ENST00000597172 LRRC73Q5JTD7 316 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms