RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 C4orf47A7E2U8 309 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 ITGAVP06756 1048 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 PSMB4P28070 264 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 WSCD2Q2TBF2 565 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 DRICH1Q6PGQ1 229 aaPredicted RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 Q6ZSR6 202 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 PTAR1Q7Z6K3 402 aaPredicted RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 CBARPQ8N350 705 aaPredicted RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 IPMKQ8NFU5 416 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 OR2I1PQ8NGU4 316 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 RTP4Q96DX8 246 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 MRGPRX2Q96LB1 330 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 TMEM109Q9BVC6 243 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 CCDC134Q9H6E4 229 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 MBNL1Q9NR56 388 aaKnown RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 ZDHHC18Q9NUE0 388 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 KCTD5Q9NXV2 234 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 ADAMTS9Q9P2N4 1935 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 GM2AP17900 193 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 IGFALSP35858 605 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 RABIFP47224 123 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 ITIH4Q14624 930 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 IRF4Q15306 451 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 P3H1Q32P28 736 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 HSD11B1LQ7Z5J1 315 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 DCP2Q8IU60 420 aaKnown RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 OR13H1Q8NG92 308 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 GORASP1Q9BQQ3 440 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 ERP44Q9BS26 406 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 FSD1LQ9BXM9 530 aa19.59■□□□□ 0.73
LSM4-203ENST00000593829 DNAAF2Q9NVR5 837 aaKnown RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 CDV3Q9UKY7 258 aaKnown RBP19.59■□□□□ 0.73
LSM4-203ENST00000593829 CFAP54Q96N23 3096 aa19.58■□□□□ 0.73
LSM4-203ENST00000593829 A0A0U1RQS6 177 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 GOLGA8CPA6NN73 597 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 DFNA5O60443 496 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 SDHBP21912 280 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 PTSQ03393 145 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 PARP6Q2NL67 630 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 ZNF317Q96PQ6 595 aaPredicted RBP19.58■□□□□ 0.72
LSM4-203ENST00000593829 ERVMER34-1Q9H9K5 563 aa19.58■□□□□ 0.72
LSM4-203ENST00000593829 DRG1Q9Y295 367 aaKnown RBP19.58■□□□□ 0.72
LSM4-203ENST00000593829 C1orf232A0A0U1RR37 186 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 TOR1BO14657 336 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 KIF1CO43896 1103 aaKnown RBP19.57■□□□□ 0.72
LSM4-203ENST00000593829 MGRN1O60291 552 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 CLDN7O95471 211 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 ETV3P41162 512 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 PFN3P60673 137 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 ZNF423Q2M1K9 1284 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 CPLX4Q7Z7G2 160 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 GPATCH11Q8N954 259 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 NUS1Q96E22 293 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 DTD2Q96FN9 168 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 SRPK1Q96SB4 655 aaKnown RBP19.57■□□□□ 0.72
LSM4-203ENST00000593829 EPB41L4BQ9H329 900 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 MAGEE1Q9HCI5 957 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 LRRK1Q38SD2 2015 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 GOLGA6L10A0A0M3HER8 536 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 IFNB1P01574 187 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 ATXN1LP0C7T5 689 aaKnown RBP19.57■□□□□ 0.72
LSM4-203ENST00000593829 HLA-DPA1P20036 260 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 STC1P52823 247 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 SLC1A5Q15758 541 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 CDKN3Q16667 212 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 RSPO4Q2I0M5 234 aaPredicted RBP19.57■□□□□ 0.72
LSM4-203ENST00000593829 UAP1L1Q3KQV9 507 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 SIRPB2Q5JXA9 342 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 Q6ZVL8 140 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 PRELID2Q8N945 189 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 CCDC197Q8NCU1 140 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 CCHCR1Q8TD31 782 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 IL21RQ9HBE5 538 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 GPR27Q9NS67 375 aa19.57■□□□□ 0.72
LSM4-203ENST00000593829 CCT8L1PA6NM43 557 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 PCCBP05166 539 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 YPEL5P62699 121 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 DR1Q01658 176 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 INPP5AQ14642 412 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 SPRED3Q2MJR0 410 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 TECPR1Q7Z6L1 1165 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 PIGWQ7Z7B1 504 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 RAVER1Q8IY67 606 aaKnown RBP19.56■□□□□ 0.72
LSM4-203ENST00000593829 SLC22A18ASQ8N1D0 253 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 OXR1Q8N573 874 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 SLC25A41Q8N5S1 370 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 CCDC89Q8N998 374 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 ELF4Q99607 663 aaPredicted RBP19.56■□□□□ 0.72
LSM4-203ENST00000593829 FICDQ9BVA6 458 aa19.56■□□□□ 0.72
LSM4-203ENST00000593829 FNDC3AQ9Y2H6 1198 aaKnown RBP19.56■□□□□ 0.72
LSM4-203ENST00000593829 SLC30A4O14863 429 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 METTL18O95568 372 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 C1SP09871 688 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 PIRTP0C851 137 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 ZNF883P0CG24 379 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 MTM1Q13496 603 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 PRAMEF14Q5SWL7 426 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 KLHDC8BQ8IXV7 354 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 GIMAP7Q8NHV1 300 aa19.55■□□□□ 0.72
LSM4-203ENST00000593829 ZFYVE1Q9HBF4 777 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms