RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ARSEP51690 589 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 MAXP61244 160 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 SLC25A11Q02978 314 aaKnown RBP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 PTSQ03393 145 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 LY6DQ14210 128 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 TGIF1Q15583 401 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 SMTNL2Q2TAL5 461 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 CCDC122Q5T0U0 273 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ARMC12Q5T9G4 340 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 KIAA1614Q5VZ46 1190 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ALG1LQ6GMV1 187 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ZNF574Q6ZN55 896 aaPredicted RBP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ZDHHC1Q8WTX9 485 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 PDCD6IPQ8WUM4 868 aaKnown RBP10.37□□□□□ -0.75
VPS4B-207ENST00000591519 NSMCE1Q8WV22 266 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 MAML1Q92585 1016 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 HSPH1Q92598 858 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 THAP2Q9H0W7 228 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 SEMA6CQ9H3T2 930 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 ABHD10Q9NUJ1 306 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 SEPT10Q9P0V9 454 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 PISDQ9UG56 409 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 AMACRQ9UHK6 382 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 MOSPD1Q9UJG1 213 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 SUFUQ9UMX1 484 aa10.37□□□□□ -0.75
VPS4B-207ENST00000591519 RHPN2P1A8MT19 583 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 C9orf172C9J069 976 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 AKR1B15C9JRZ8 316 aaPredicted RBP10.36□□□□□ -0.75
VPS4B-207ENST00000591519 CFAP99D6REC4 459 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 J3QKU1 62 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 MYO1FO00160 1098 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 HGSO14964 777 aaPredicted RBP10.36□□□□□ -0.75
VPS4B-207ENST00000591519 AKR1B10O60218 316 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ECEL1O95672 775 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 SOD1P00441 154 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ITGB2P05107 769 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 CYP1A2P05177 515 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 PDHA1P08559 390 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 KRT10P13645 584 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ITIH1P19827 911 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 CD82P27701 267 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ADCY8P40145 1251 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ETV5P41161 510 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 WDR4P57081 412 aaKnown RBP10.36□□□□□ -0.75
VPS4B-207ENST00000591519 OR1D5P58170 312 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 CTBSQ01459 385 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 GALNT2Q10471 571 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 IHHQ14623 411 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 C16orf72Q14CZ0 275 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 PAFAH1B3Q15102 231 aaKnown RBP10.36□□□□□ -0.75
VPS4B-207ENST00000591519 PTPRRQ15256 657 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 LINC00303Q3SY05 128 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 DESI1Q6ICB0 168 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ALKBH5Q6P6C2 394 aaKnown RBP10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ADAMTSL4Q6UY14 1074 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 USP45Q70EL2 814 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ZNF765Q7L2R6 523 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 TSPAN33Q86UF1 283 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 JAMLQ86YT9 394 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 NAGSQ8N159 534 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 NDUFAF2Q8N183 169 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ATPAF2Q8N5M1 289 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 USP7Q93009 1102 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 SGF29Q96ES7 293 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 BTBD6Q96KE9 485 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 TSGA13Q96PP4 275 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 DNAJC7Q99615 494 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 CHP1Q99653 195 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 DPYSL5Q9BPU6 564 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 ABCG8Q9H221 673 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 MAP10Q9P2G4 905 aa10.36□□□□□ -0.75
VPS4B-207ENST00000591519 FLNBO75369 2602 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PRAMEF33A0A0G2JMD5 474 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 A0A0J9YYE9 177 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 MATN3O15232 486 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PPM1DO15297 605 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PRAMEF10O60809 474 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PRLP01236 227 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 TRBC1P01850 177 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PYGLP06737 847 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 ZNF30P17039 623 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 CCNCP24863 283 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 AK4P27144 223 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 ALDH4A1P30038 563 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 GARSP41250 739 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 GNPDA1P46926 289 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 POLD2P49005 469 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 LIMK2P53671 638 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 MAZP56270 477 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 RPL26P61254 145 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 TBX2Q13207 712 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 TRA2AQ13595 282 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 HADHQ16836 314 aaKnown RBP10.35□□□□□ -0.75
VPS4B-207ENST00000591519 PYCR3Q53H96 274 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 TMEM164Q5U3C3 297 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 DENND2CQ68D51 928 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 RAET1GQ6H3X3 334 aa10.35□□□□□ -0.75
VPS4B-207ENST00000591519 TIGD7Q6NT04 549 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms