RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TRA2AQ13595 282 aaKnown RBP eCLIP7.56□□□□□ -1.2
NPC1-208ENST00000590301 MESDQ14696 234 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 TCEA2Q15560 299 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 MAP9Q49MG5 647 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 ATP13A4Q4VNC1 1196 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 ODF2Q5BJF6 829 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 TMEM164Q5U3C3 297 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 SLC9A4Q6AI14 798 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 FOXR1Q6PIV2 292 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 XKR5Q6UX68 686 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 B3GNT8Q7Z7M8 397 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 PIM3Q86V86 326 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 NRROSQ86YC3 692 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 GALNT13Q8IUC8 556 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 VSTM4Q8IW00 320 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 SLITRK4Q8IW52 837 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 RHOT1Q8IXI2 618 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 PELI3Q8N2H9 469 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 Q8N9G6 341 aaPredicted RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 AVL9Q8NBF6 648 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 SLC35G2Q8TBE7 412 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 ZDHHC1Q8WTX9 485 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 NAF1Q96HR8 494 aaKnown RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 COX14Q96I36 57 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 MLPHQ9BV36 600 aaPredicted RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 MAK16Q9BXY0 300 aaKnown RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 PACSIN1Q9BY11 444 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 NHEJ1Q9H9Q4 299 aaPredicted RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 SPATS2LQ9NUQ6 558 aaKnown RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 DDX56Q9NY93 547 aaKnown RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 GOLGA6AQ9NYA3 693 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 PKD2L2Q9NZM6 624 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 ATXN7L1Q9ULK2 861 aaPredicted RBP7.56□□□□□ -1.2
NPC1-208ENST00000590301 CHKBQ9Y259 395 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 DOCK4Q8N1I0 1966 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 PLXNB3Q9ULL4 1909 aa7.56□□□□□ -1.2
NPC1-208ENST00000590301 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 C1orf232A0A0U1RR37 186 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 ANKRD66B4E2M5 251 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 K7ENP7 123 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 KCNK1O00180 336 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 MTSS1O43312 755 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 ECEL1O95672 775 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SOD1P00441 154 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 PRLP01236 227 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 JCHAINP01591 159 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 FUCA1P04066 466 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SLC5A2P31639 672 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 ACTR1BP42025 376 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 CD86P42081 329 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 FASLGP48023 281 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SPINT3P49223 89 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 DCDC1P59894 354 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 ACTR1AP61163 376 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 NIPAL4Q0D2K0 466 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SLC10A2Q12908 348 aaPredicted RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 CLN3Q13286 438 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 PYCR3Q53H96 274 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 PDPK2PQ6A1A2 396 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 INO80CQ6PI98 192 aaPredicted RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 SLC30A9Q6PML9 568 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 CCDC81Q6ZN84 652 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 NYAP1Q6ZVC0 841 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 JAMLQ86YT9 394 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 PLD5Q8N7P1 536 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 CCDC112Q8NEF3 446 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 LPCAT1Q8NF37 534 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 OR4D9Q8NGE8 314 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 CCL4L1Q8NHW4 92 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 RAPGEF5Q92565 580 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SCAMP4Q969E2 229 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SH3KBP1Q96B97 665 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 HS3ST6Q96QI5 342 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 CCNL2Q96S94 520 aaPredicted RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 RIOK2Q9BVS4 552 aaKnown RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 FOXP3Q9BZS1 431 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 SLC25A51Q9H1U9 297 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 TSPY26PQ9H489 355 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 EPB41L1Q9H4G0 881 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 FAM83DQ9H4H8 585 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 STN1Q9H668 368 aaKnown RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 LUC7LQ9NQ29 371 aaKnown RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 SEPT10Q9P0V9 454 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 NFKBIL1Q9UBC1 381 aaPredicted RBP7.55□□□□□ -1.2
NPC1-208ENST00000590301 HEY1Q9Y5J3 304 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 PTPRBP23467 1997 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 CHD5Q8TDI0 1954 aa7.55□□□□□ -1.2
NPC1-208ENST00000590301 HELZ2Q9BYK8 2649 aaKnown RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 KNTC1P50748 2209 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 KIR2DS5A0A0G2JLQ3 304 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 A0A0G2JNG1 304 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 C3orf70A6NLC5 250 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 OR5K4A6NMS3 321 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 AKR1B15C9JRZ8 316 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 KIR2DS3K7RE56 304 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 B4GAT1O43505 415 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 PSTPIP1O43586 416 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms