RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ZSCAN1Q8NBB4 408 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 EXD1Q8NHP7 514 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 FATE1Q969F0 183 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 SCARF2Q96GP6 870 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 TSGA13Q96PP4 275 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 SMIM14Q96QK8 99 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 B3GNT4Q9C0J1 378 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 PLEKHM1Q9Y4G2 1056 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ST14Q9Y5Y6 855 aa17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 ASH1LQ9NR48 2969 aaKnown RBP17.85■□□□□ 0.45
PRKCSH-211ENST00000590098 IGHV5-10-1A0A0J9YXX1 117 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 C9orf172C9J069 976 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 J3QKU1 62 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 HGSO14964 777 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 PPM1DO15297 605 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 PROSCO94903 275 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 ASMTLO95671 621 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 KRT7P08729 469 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 PYCR3Q53H96 274 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 ZNF574Q6ZN55 896 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 RCBTB1Q8NDN9 531 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 CTNNBL1Q8WYA6 563 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 CCDC74BQ96LY2 380 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 RIOK2Q9BVS4 552 aaKnown RBP17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 TDRD1Q9BXT4 1180 aaKnown RBP17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 KCNK4Q9NYG8 393 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 FOXJ2Q9P0K8 574 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 UVRAGQ9P2Y5 699 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 LCMT1Q9UIC8 334 aa17.84■□□□□ 0.45
PRKCSH-211ENST00000590098 BOD1L1Q8NFC6 3051 aa17.83■□□□□ 0.45
PRKCSH-211ENST00000590098 B8ZZF3 427 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 INPP4BO15327 924 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 GYPCP04921 128 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 H2AFZP0C0S5 128 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 CCL4P13236 92 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 PPM1FP49593 454 aaPredicted RBP17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 LIMK2P53671 638 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 RPL26P61254 145 aaKnown RBP17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 TRA2AQ13595 282 aaKnown RBP eCLIP17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 LRP8Q14114 963 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 NKAIN2Q5VXU1 208 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 H2AFVQ71UI9 128 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 RAVER1Q8IY67 606 aaKnown RBP17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 CCNYQ8ND76 341 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 LPCAT1Q8NF37 534 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 OR4D9Q8NGE8 314 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 ZNF830Q96NB3 372 aaPredicted RBP17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 AGAP2Q99490 1192 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 DPYSL5Q9BPU6 564 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 ARHGAP9Q9BRR9 750 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 ZMYND15Q9H091 742 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 PCDH9Q9HC56 1237 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 IFNKQ9P0W0 207 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 ZNHIT2Q9UHR6 403 aa17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 RPL26L1Q9UNX3 145 aaKnown RBP17.83■□□□□ 0.44
PRKCSH-211ENST00000590098 IGHV1OR21-1A0A087WYE8 117 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 CLDN7O95471 211 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 HLA-DQB2P05538 268 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 CASP14P31944 242 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 CSTF2P33240 577 aaKnown RBP eCLIP17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 TAS2R40P59535 323 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 GBE1Q04446 702 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 SQSTM1Q13501 440 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 IHHQ14623 411 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 XKR5Q6UX68 686 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 VASH2Q86V25 355 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 CPNE8Q86YQ8 564 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 CCDC112Q8NEF3 446 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 ARRDC2Q8TBH0 407 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 AHCYL2Q96HN2 611 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 COX14Q96I36 57 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 TAAR9Q96RI9 348 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC38A3Q99624 504 aa17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.82■□□□□ 0.44
PRKCSH-211ENST00000590098 TRBV23OR9-2A0A075B6M9 112 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 C1orf232A0A0U1RR37 186 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 STMND1H3BQB6 276 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 PRLP01236 227 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 ITGB2P05107 769 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 TPM3P06753 285 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 GPLD1P80108 840 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 NIPAL4Q0D2K0 466 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 CHST15Q7LFX5 561 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 DTX1Q86Y01 620 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 CCDC13Q8IYE1 715 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 PQLC3Q8N755 202 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 AGBL5Q8NDL9 886 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 CCHCR1Q8TD31 782 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 LRRN4Q8WUT4 740 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 FAF2Q96CS3 445 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 HDAC11Q96DB2 347 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 LYSMD1Q96S90 227 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 MLPHQ9BV36 600 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 ADGRE3Q9BY15 652 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 VPS18Q9P253 973 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 SDK2Q58EX2 2172 aa17.81■□□□□ 0.44
PRKCSH-211ENST00000590098 SPTA1P02549 2419 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 PYCARD-AS1I3L0S3 204 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms