RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	CYP4F12	Q9HCS2	524 aa		17.22	■□□□□ 0.35
MBD1-221	ENST00000589867	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	17.22	■□□□□ 0.35
MBD1-221	ENST00000589867	TMPRSS11E	Q9UL52	423 aa		17.22	■□□□□ 0.35
MBD1-221	ENST00000589867	TMEM98	Q9Y2Y6	226 aa		17.22	■□□□□ 0.35
MBD1-221	ENST00000589867	RGSL1	A5PLK6	1076 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	GOLGA6C	A6NDK9	693 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	GOLGA6B	A6NDN3	693 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	C5orf60	A6NFR6	353 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	AGT	P01019	485 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	GOLGA6D	P0CG33	693 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	ALPPL2	P10696	532 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	BPI	P17213	487 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	KEL	P23276	732 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	CA5A	P35218	305 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	INSM1	Q01101	510 aa	Predicted RBP	17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	ILK	Q13418	452 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	RANBP10	Q6VN20	620 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	SLC13A5	Q86YT5	568 aa	Predicted RBP	17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	SLC25A41	Q8N5S1	370 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	FAM71D	Q8N9W8	422 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	ATL2	Q8NHH9	583 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	GOLGA6A	Q9NYA3	693 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	SUFU	Q9UMX1	484 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	PLEKHM1	Q9Y4G2	1056 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	CELSR3	Q9NYQ7	3312 aa		17.21	■□□□□ 0.35
MBD1-221	ENST00000589867	LAMA5	O15230	3695 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	ACACA	Q13085	2346 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	EME2	A4GXA9	379 aa	Predicted RBP	17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	INPP4B	O15327	924 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	METTL18	O95568	372 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	IVL	P07476	585 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	ANXA6	P08133	673 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	DCDC1	P59894	354 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	DAB2	P98082	770 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	ELOC	Q15369	112 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	RPS6KA1	Q15418	735 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	OASL	Q15646	514 aa	Known RBP	17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	PERM1	Q5SV97	790 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	KCTD11	Q693B1	232 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	DENND5A	Q6IQ26	1287 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	LVRN	Q6Q4G3	990 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	REXO1L1P	Q8IX06	675 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	KY	Q8NBH2	561 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	TTC13	Q8NBP0	860 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	GPBAR1	Q8TDU6	330 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	HIC2	Q96JB3	615 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	PDLIM2	Q96JY6	352 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	TMEM121	Q9BTD3	319 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	FICD	Q9BVA6	458 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	CARD9	Q9H257	536 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	PKD2L2	Q9NZM6	624 aa		17.2	■□□□□ 0.34
MBD1-221	ENST00000589867	ANKRD11	Q6UB99	2663 aa	Predicted RBP	17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	UNC13C	Q8NB66	2214 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	PDE2A	O00408	941 aa	Predicted RBP	17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	NOBOX	O60393	691 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	DNAJC6	O75061	913 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	CTSE	P14091	401 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	GEM	P55040	296 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	CDCP2	Q5VXM1	449 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	ITPRIPL1	Q6GPH6	555 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	OGFOD3	Q6PK18	319 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	DOK6	Q6PKX4	331 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	UNQ6494/PRO21346	Q6UXR6	183 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	SDR16C5	Q8N3Y7	309 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	GPR156	Q8NFN8	814 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	IFI44	Q8TCB0	444 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	CCHCR1	Q8TD31	782 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	UBE2Q2	Q8WVN8	375 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	RTP4	Q96DX8	246 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	APOL2	Q9BQE5	337 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	CARS2	Q9HA77	564 aa	Known RBP	17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	SPATS2L	Q9NUQ6	558 aa	Known RBP	17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	IL17C	Q9P0M4	197 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	RABGEF1	Q9UJ41	708 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	CACNA1B	Q00975	2339 aa		17.19	■□□□□ 0.34
MBD1-221	ENST00000589867	KIF26B	Q2KJY2	2108 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	ZNF106	Q9H2Y7	1883 aa	Known RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	GOLGA6L9	A6NEM1	432 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	GAPDHS	O14556	408 aa	Predicted RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	LIAS	O43766	372 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	OPA1	O60313	960 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	SLC4A1	P02730	911 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	ATP1A1	P05023	1023 aa	Known RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	FGF1	P05230	155 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	HLA-DPA1	P20036	260 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	AK4	P27144	223 aa	Predicted RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	HMGCL	P35914	325 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	ADCY8	P40145	1251 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	GNPDA1	P46926	289 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	PTPRCAP	Q14761	206 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	NR0B2	Q15466	257 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	KHDC1	Q4VXA5	237 aa	Known RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	PYCR3	Q53H96	274 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	ZNF648	Q5T619	568 aa	Predicted RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	HES3	Q5TGS1	186 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	ALS2CL	Q60I27	953 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	EFL1	Q7Z2Z2	1120 aa	Known RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	TMPRSS12	Q86WS5	348 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	C1orf54	Q8WWF1	131 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	GPR63	Q9BZJ6	419 aa		17.18	■□□□□ 0.34

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