RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 EPHB3P54753 998 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 CDH13P55290 713 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 ARF5P84085 180 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 LRP8Q14114 963 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 OGFRL1Q5TC84 451 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 KANK2Q63ZY3 851 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 LPCAT4Q643R3 524 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 EFL1Q7Z2Z2 1120 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 DEFB128Q7Z7B8 93 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 CARNMT1Q8N4J0 409 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 LRGUKQ96M69 825 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 BTBD9Q96Q07 612 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 PFDN4Q9NQP4 134 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 CACNA2D2Q9NY47 1150 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 PDP2Q9P2J9 529 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 SUCOQ9UBS9 1254 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 TRMT6Q9UJA5 497 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 PCDHGA7Q9Y5G6 932 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 C2orf78A6NCI8 922 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 GOLGA8CPA6NN73 597 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 BBIP1A8MTZ0 92 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 PRRG1O14668 218 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 NRP2O60462 931 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 CLASP2O75122 1294 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 PRSS56P0CW18 603 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 UQCRBP14927 111 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 DPP6P42658 865 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 LCP2Q13094 533 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 ZRANB3Q5FWF4 1079 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 RARS2Q5T160 578 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 UGT3A1Q6NUS8 523 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 STK40Q8N2I9 435 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 EFHBQ8N7U6 833 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 PCYOX1LQ8NBM8 494 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 ICA1LQ8NDH6 482 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 BHLHE22Q8NFJ8 381 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 RIN3Q8TB24 985 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 ASB9Q96DX5 294 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 TMEM169Q96HH4 297 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 ZNF558Q96NG5 402 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 GPR21Q99679 349 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 HERC2P3Q9BVR0 1158 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 FKBPLQ9UIM3 349 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 MAFFQ9ULX9 164 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 MTF2Q9Y483 593 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 DNAJC15Q9Y5T4 150 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 CENPFP49454 3210 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 MRASO14807 208 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 KIF1CO43896 1103 aaKnown RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 SIX3O95343 332 aaPredicted RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 PEX2P28328 305 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 EEF1DP29692 281 aaKnown RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 PTGER3P43115 390 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 RHOAP61586 193 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 CLCQ05315 142 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 TRAP1Q12931 704 aaKnown RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 TRAF2Q12933 501 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 MED21Q13503 144 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 RAB33AQ14088 237 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 LRRC36Q1X8D7 754 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 PABPC1LQ4VXU2 614 aaKnown RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 SETMARQ53H47 684 aaPredicted RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 ANKRD33Q7Z3H0 272 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 DNAJB7Q7Z6W7 309 aaPredicted RBP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 TTC30BQ8N4P2 665 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 HMGCLL1Q8TB92 370 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 TWIST2Q8WVJ9 160 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 AKTIPQ9H8T0 292 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 LHX3Q9UBR4 397 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 CROTQ9UKG9 612 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 MED16Q9Y2X0 877 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 PKP3Q9Y446 797 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 DTNAQ9Y4J8 743 aa19.06■□□□□ 0.64
PRKCSH-209ENST00000589838 CARNS1A5YM72 827 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 ACOT8O14734 319 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 ECI2O75521 394 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 CRCPO75575 148 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 ADARP55265 1226 aaKnown RBP19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 IL2P60568 153 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 MRPS22P82650 360 aaKnown RBP19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 SMAD3P84022 425 aaKnown RBP19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 MS4A2Q01362 244 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 TWF1Q12792 350 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 TRIM25Q14258 630 aaKnown RBP19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 GRAMD1BQ3KR37 738 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 SFT2D3Q587I9 215 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 CNKSR3Q6P9H4 555 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 PIP4K2CQ8TBX8 421 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 TRPC4APQ8TEL6 797 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 ROPN1LQ96C74 230 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 BIRC8Q96P09 236 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 C1QTNF3Q9BXJ4 246 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 EBF3Q9H4W6 596 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 SPAG4Q9NPE6 437 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 FBP2O00757 339 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 KLK8O60259 260 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 SNAP91O60641 907 aa19.05■□□□□ 0.64
PRKCSH-209ENST00000589838 MLYCDO95822 493 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms