RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 CD1CP29017 333 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 ALDH4A1P30038 563 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 GJC1P36383 396 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 OR1D5P58170 312 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 IFI35P80217 286 aaPredicted RBP12.15□□□□□ -0.46
VAT1-206ENST00000589709 PPIDQ08752 370 aaKnown RBP12.15□□□□□ -0.46
VAT1-206ENST00000589709 TRIM14Q14142 442 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 GSE1Q14687 1217 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 TMPRSS9Q7Z410 1059 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 ZNF830Q96NB3 372 aaPredicted RBP12.15□□□□□ -0.46
VAT1-206ENST00000589709 AGAP2Q99490 1192 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 DPYSL5Q9BPU6 564 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 RIOK2Q9BVS4 552 aaKnown RBP12.15□□□□□ -0.46
VAT1-206ENST00000589709 PACSIN1Q9BY11 444 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 SEMA6CQ9H3T2 930 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 SUDS3Q9H7L9 328 aaPredicted RBP12.15□□□□□ -0.46
VAT1-206ENST00000589709 AKAP7Q9P0M2 348 aaPredicted RBP12.15□□□□□ -0.46
VAT1-206ENST00000589709 VPS18Q9P253 973 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 CD84Q9UIB8 345 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 TMEM98Q9Y2Y6 226 aa12.15□□□□□ -0.46
VAT1-206ENST00000589709 ATMQ13315 3056 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ANKRD66B4E2M5 251 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 PPM1DO15297 605 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 AKR1B10O60218 316 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 MTA2O94776 668 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 CLDN7O95471 211 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 JCHAINP01591 159 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 MMP2P08253 660 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 LIPCP11150 499 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ITIH1P19827 911 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ACTR1BP42025 376 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ARHGAP25P42331 645 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 FASLGP48023 281 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ACTR1AP61163 376 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 BIRC2Q13490 618 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 TRA2AQ13595 282 aaKnown RBP eCLIP12.14□□□□□ -0.47
VAT1-206ENST00000589709 C16orf72Q14CZ0 275 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ZSCAN23Q3MJ62 389 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 AMZ1Q400G9 498 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 MAP9Q49MG5 647 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 PHF19Q5T6S3 580 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 LRRC38Q5VT99 294 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 DOK6Q6PKX4 331 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ZNF574Q6ZN55 896 aaPredicted RBP12.14□□□□□ -0.47
VAT1-206ENST00000589709 USP53Q70EK8 1073 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 GALNT13Q8IUC8 556 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 CNTD1Q8N815 330 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 CCNYQ8ND76 341 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 DEF6Q9H4E7 631 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 FAM83DQ9H4H8 585 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 RMI1Q9H9A7 625 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 RDH14Q9HBH5 336 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ZNHIT6Q9NWK9 470 aaKnown RBP12.14□□□□□ -0.47
VAT1-206ENST00000589709 CNOT6Q9ULM6 557 aaKnown RBP12.14□□□□□ -0.47
VAT1-206ENST00000589709 PLEKHM1Q9Y4G2 1056 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 TTLL3Q9Y4R7 772 aa12.14□□□□□ -0.47
VAT1-206ENST00000589709 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 COL6A6A6NMZ7 2263 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 PRAMEF33A0A0G2JMD5 474 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 IGHV5-10-1A0A0J9YXX1 117 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 C9orf172C9J069 976 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.13□□□□□ -0.47
VAT1-206ENST00000589709 PRAMEF10O60809 474 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 ETV5P41161 510 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 SPINT3P49223 89 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 LIMK2P53671 638 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 GPLD1P80108 840 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 MESDQ14696 234 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 TGIF1Q15583 401 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 QPCTQ16769 361 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 ZFYVE27Q5T4F4 411 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 HENMT1Q5T8I9 393 aaKnown RBP12.13□□□□□ -0.47
VAT1-206ENST00000589709 TMEM164Q5U3C3 297 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 SLC9A4Q6AI14 798 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 XKR5Q6UX68 686 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 ZNF605Q86T29 641 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 TRIM74Q86UV6 250 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 DTX1Q86Y01 620 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 SFRP1Q8N474 314 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
VAT1-206ENST00000589709 PLD5Q8N7P1 536 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 LPCAT1Q8NF37 534 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 OR4D9Q8NGE8 314 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 SLC35G2Q8TBE7 412 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 USP7Q93009 1102 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 WDR24Q96S15 920 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 NUDT22Q9BRQ3 303 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 MLPHQ9BV36 600 aaPredicted RBP12.13□□□□□ -0.47
VAT1-206ENST00000589709 ADGRE3Q9BY15 652 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 BRD8Q9H0E9 1235 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 PKD2L2Q9NZM6 624 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 SEPT10Q9P0V9 454 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 PDP2Q9P2J9 529 aa12.13□□□□□ -0.47
VAT1-206ENST00000589709 PCDHGA3Q9Y5H0 932 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms