RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TBC1D29Q9UFV1 150 aa14.99□□□□□ -0.01
SF3A2-204ENST00000589118 CROTQ9UKG9 612 aa14.99□□□□□ -0.01
SF3A2-204ENST00000589118 AP4E1Q9UPM8 1137 aa14.99□□□□□ -0.01
SF3A2-204ENST00000589118 SHANK1Q9Y566 2161 aa14.99□□□□□ -0.01
SF3A2-204ENST00000589118 TTLL8A6PVC2 850 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 DAPK3O43293 454 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 HTRA2O43464 458 aaPredicted RBP14.98□□□□□ -0.01
SF3A2-204ENST00000589118 SNX2O60749 519 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 VPS4BO75351 444 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 ASMTLO95671 621 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 FASLGP48023 281 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 SEPHS1P49903 392 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 GFERP55789 205 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 JAM2P57087 298 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 SH3BP2P78314 561 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 HHEXQ03014 270 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 IL10RBQ08334 325 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 DPCR1Q3MIW9 517 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 PPP1R15BQ5SWA1 713 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 FHL5Q5TD97 284 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 TCTN3Q6NUS6 607 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 DNAJC24Q6P3W2 148 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 MON1BQ7L1V2 547 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 CHST15Q7LFX5 561 aaPredicted RBP14.98□□□□□ -0.01
SF3A2-204ENST00000589118 PHF13Q86YI8 300 aaPredicted RBP14.98□□□□□ -0.01
SF3A2-204ENST00000589118 CCDC13Q8IYE1 715 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 RUFY1Q96T51 708 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 DPYSL5Q9BPU6 564 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 ZNHIT2Q9UHR6 403 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 VPS4AQ9UN37 437 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 KCNK6Q9Y257 313 aa14.98□□□□□ -0.01
SF3A2-204ENST00000589118 OAS3Q9Y6K5 1087 aaKnown RBP14.98□□□□□ -0.01
SF3A2-204ENST00000589118 MKRN2OSH3BPM6 223 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 PDHA1P08559 390 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 AP1S1P61966 158 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 MC1RQ01726 317 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 CHAF1BQ13112 559 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 NADK2Q4G0N4 442 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 PRR30Q53SZ7 412 aaPredicted RBP14.97□□□□□ -0.01
SF3A2-204ENST00000589118 PPP6R3Q5H9R7 873 aaPredicted RBP14.97□□□□□ -0.01
SF3A2-204ENST00000589118 WDR74Q6RFH5 385 aaPredicted RBP14.97□□□□□ -0.01
SF3A2-204ENST00000589118 RFX8Q6ZV50 586 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 FAM114A1Q8IWE2 563 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.97□□□□□ -0.01
SF3A2-204ENST00000589118 AP2M1Q96CW1 435 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 PSKH2Q96QS6 385 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 CNPY3Q9BT09 278 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 EFHD1Q9BUP0 239 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 SNRNP25Q9BV90 132 aaKnown RBP14.97□□□□□ -0.01
SF3A2-204ENST00000589118 ULBP3Q9BZM4 244 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 ETNK2Q9NVF9 386 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 LUZP4Q9P127 313 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 KCTD3Q9Y597 815 aa14.97□□□□□ -0.01
SF3A2-204ENST00000589118 CENPEQ02224 2701 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 ATMINO43313 823 aaPredicted RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 PEX11BO96011 259 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 CALB1P05937 261 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 TYRP1P17643 537 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 GSCP56915 257 aaPredicted RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 IHHQ14623 411 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 EIF2S3LQ2VIR3 472 aaKnown RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 ZNF648Q5T619 568 aaPredicted RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 C6orf15Q6UXA7 325 aaPredicted RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 GALNT13Q8IUC8 556 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 ESX1Q8N693 406 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 MLKLQ8NB16 471 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 CPT1CQ8TCG5 803 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 SSC4DQ8WTU2 575 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 RIOK2Q9BVS4 552 aaKnown RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 TRIM7Q9C029 511 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 AKIRIN1Q9H9L7 192 aaPredicted RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 SIDT1Q9NXL6 827 aaKnown RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 OGFRQ9NZT2 677 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 RCOR3Q9P2K3 495 aaPredicted RBP14.96□□□□□ -0.01
SF3A2-204ENST00000589118 PHTF1Q9UMS5 762 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 PCDHB3Q9Y5E6 796 aa14.96□□□□□ -0.01
SF3A2-204ENST00000589118 MED13Q9UHV7 2174 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 ESPL1Q14674 2120 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.95□□□□□ -0.02
SF3A2-204ENST00000589118 KIF1CO43896 1103 aaKnown RBP14.95□□□□□ -0.02
SF3A2-204ENST00000589118 DNAJC6O75061 913 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 KIAA0754O94854 1291 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 CYP2A6P11509 494 aaPredicted RBP14.95□□□□□ -0.02
SF3A2-204ENST00000589118 ACP5P13686 325 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 LEPRP48357 1165 aaKnown RBP14.95□□□□□ -0.02
SF3A2-204ENST00000589118 PTSQ03393 145 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 ZNF235Q14590 738 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 TCP11X2Q5H9J9 407 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 LRRC66Q68CR7 880 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 DCUN1D2Q6PH85 259 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 IYDQ6PHW0 289 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 ADAMTSL4Q6UY14 1074 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 TRIM72Q6ZMU5 477 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 CYP4V2Q6ZWL3 525 aaPredicted RBP14.95□□□□□ -0.02
SF3A2-204ENST00000589118 PIH1D2Q8WWB5 315 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 SCRN2Q96FV2 425 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 OR6C1Q96RD1 312 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 NUDCD1Q96RS6 583 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 ZPBPQ9BS86 351 aa14.95□□□□□ -0.02
SF3A2-204ENST00000589118 TWSG1Q9GZX9 223 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms