RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ARMC12Q5T9G4 340 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 ANKS6Q68DC2 871 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 ARHGAP22Q7Z5H3 698 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 CACNA2D3Q8IZS8 1091 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 ATPAF2Q8N5M1 289 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 IL22RA1Q8N6P7 574 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 AP2M1Q96CW1 435 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 EPN3Q9H201 632 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 ANO10Q9NW15 660 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 SLC39A1Q9NY26 324 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 GOLGA6AQ9NYA3 693 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 AIPL1Q9NZN9 384 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 SCINQ9Y6U3 715 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 A0A0J9YYE9 177 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 EFCAB7A8K855 629 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 DNAJC6O75061 913 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 TRBC1P01850 177 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 RARAP10276 462 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 NFKBIAP25963 317 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 STC1P52823 247 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 RAB15P59190 212 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 SLC25A11Q02978 314 aaKnown RBP18.3■□□□□ 0.52
CCDC43-204ENST00000588687 PEX6Q13608 980 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 LRP8Q14114 963 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 NLRP8Q86W28 1048 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 RTP4Q96DX8 246 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 SLC45A3Q96JT2 553 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 WDR24Q96S15 920 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 ASPSCR1Q9BZE9 553 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 PCDH18Q9HCL0 1135 aa18.3■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF106Q9H2Y7 1883 aaKnown RBP18.3■□□□□ 0.52
CCDC43-204ENST00000588687 DUX1O43812 170 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 MAP3K6O95382 1288 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF30P17039 623 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 IL4RP24394 825 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 ARL4AP40617 200 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 ASIC2Q16515 512 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 MARC1Q5VT66 337 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 WDR74Q6RFH5 385 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 MARK2Q7KZI7 788 aaKnown RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 TIPARPQ7Z3E1 657 aaKnown RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 FAM129CQ86XR2 697 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 PTRH1Q86Y79 214 aaKnown RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 HSPH1Q92598 858 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 ISCUQ9H1K1 167 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 NT5MQ9NPB1 228 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 RTN4Q9NQC3 1192 aaKnown RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 CNOT6Q9ULM6 557 aaKnown RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 OAS3Q9Y6K5 1087 aaKnown RBP18.29■□□□□ 0.52
CCDC43-204ENST00000588687 TEX15Q9BXT5 2789 aa18.29■□□□□ 0.52
CCDC43-204ENST00000588687 CLEC18AA5D8T8 446 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF891A8MT65 544 aaPredicted RBP18.28■□□□□ 0.52
CCDC43-204ENST00000588687 MFSD11O43934 449 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 PRLP01236 227 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
CCDC43-204ENST00000588687 MC2RQ01718 297 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 BIRC2Q13490 618 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 BOLA3Q53S33 107 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 DCAF12Q5T6F0 453 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 CLEC18BQ6UXF7 455 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 GALNT13Q8IUC8 556 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 BBS5Q8N3I7 341 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 AOPEPQ8N6M6 819 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 NIPA2Q8N8Q9 360 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 CLEC18CQ8NCF0 446 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 FAM71BQ8TC56 605 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 TEKT4Q8WW24 435 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 MAML1Q92585 1016 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 TEFMQ96QE5 360 aaKnown RBP18.28■□□□□ 0.52
CCDC43-204ENST00000588687 TDRD1Q9BXT4 1180 aaKnown RBP18.28■□□□□ 0.52
CCDC43-204ENST00000588687 VPS18Q9P253 973 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 TBC1D29Q9UFV1 150 aa18.28■□□□□ 0.52
CCDC43-204ENST00000588687 SPTAN1Q13813 2472 aaKnown RBP18.28■□□□□ 0.52
CCDC43-204ENST00000588687 LOC101059948A0A1B0GTJ6 334 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 NKX2-8O15522 239 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 DLGAP3O95886 979 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 MYBL1P10243 752 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 SERPINB6P35237 376 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 CDC20Q12834 499 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 SKIDA1Q1XH10 827 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 SASS6Q6UVJ0 657 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 OR10G6Q8NH81 332 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 TRIM11Q96F44 468 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 CATSPER2Q96P56 530 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 LYSMD1Q96S90 227 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 CTRCQ99895 268 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 RIOK2Q9BVS4 552 aaKnown RBP18.27■□□□□ 0.52
CCDC43-204ENST00000588687 APMAPQ9HDC9 416 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 SARS2Q9NP81 518 aaKnown RBP18.27■□□□□ 0.52
CCDC43-204ENST00000588687 SIDT1Q9NXL6 827 aaKnown RBP18.27■□□□□ 0.52
CCDC43-204ENST00000588687 MYO1AQ9UBC5 1043 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 PRKAB1Q9Y478 270 aa18.27■□□□□ 0.52
CCDC43-204ENST00000588687 TMEM184BQ9Y519 407 aaPredicted RBP18.27■□□□□ 0.52
CCDC43-204ENST00000588687 TRBV23OR9-2A0A075B6M9 112 aa18.26■□□□□ 0.51
CCDC43-204ENST00000588687 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
CCDC43-204ENST00000588687 INPP4BO15327 924 aa18.26■□□□□ 0.51
CCDC43-204ENST00000588687 ATP1A1P05023 1023 aaKnown RBP18.26■□□□□ 0.51
CCDC43-204ENST00000588687 PYGLP06737 847 aa18.26■□□□□ 0.51
CCDC43-204ENST00000588687 CD48P09326 243 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms