RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CEACAM1P13688 526 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 KELP23276 732 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 NOVA1P51513 510 aaKnown RBP20.09■□□□□ 0.81
DDX39A-207ENST00000588542 HK3P52790 923 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 ALS2CLQ60I27 953 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 PSAPL1Q6NUJ1 521 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 HID1Q8IV36 788 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 BRSK1Q8TDC3 778 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 BTN2A2Q8WVV5 523 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 LRRC45Q96CN5 670 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 HIC2Q96JB3 615 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 LRRC61Q9BV99 259 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 CDH19Q9H159 772 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 SLC32A1Q9H598 525 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 RAD18Q9NS91 495 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.09■□□□□ 0.81
DDX39A-207ENST00000588542 FEZ2Q9UHY8 353 aaPredicted RBP20.09■□□□□ 0.81
DDX39A-207ENST00000588542 ARL5AQ9Y689 179 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 DGKBQ9Y6T7 804 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 SPTBN2O15020 2390 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 SPEGQ15772 3267 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 PDE2AO00408 941 aaPredicted RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 INPP4BO15327 924 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 RASGRP1O95267 797 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 ETF1P62495 437 aaKnown RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 PTPRCAPQ14761 206 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 TAF1AQ15573 450 aaPredicted RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 PPM1JQ5JR12 505 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 CCDC137Q6PK04 289 aaKnown RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 C4orf22Q6V702 233 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 DGLUCYQ7Z3D6 616 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 TRIM74Q86UV6 250 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 EID2Q8N6I1 236 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 PTCD2Q8WV60 388 aaKnown RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 CAPZA3Q96KX2 299 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 TBATAQ96M53 351 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 PLEKHG4BQ96PX9 1271 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 SPATA16Q9BXB7 569 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 SLC13A1Q9BZW2 595 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 CLPBQ9H078 707 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 PIH1D1Q9NWS0 290 aaKnown RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 NEU2Q9Y3R4 380 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 KCTD3Q9Y597 815 aa20.08■□□□□ 0.81
DDX39A-207ENST00000588542 OAS3Q9Y6K5 1087 aaKnown RBP20.08■□□□□ 0.81
DDX39A-207ENST00000588542 ARHGEF17Q96PE2 2063 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-207ENST00000588542 GOLGA4Q13439 2230 aaKnown RBP20.07■□□□□ 0.8
DDX39A-207ENST00000588542 PRSS38A1L453 326 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 GAPDHSO14556 408 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-207ENST00000588542 SCAMP1O15126 338 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 AQP9O43315 295 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 TPH1P17752 444 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 LPOP22079 712 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-207ENST00000588542 GRIA1P42261 906 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 POLD2P49005 469 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 BLKP51451 505 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 C1orf61Q13536 156 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 TRIP13Q15645 432 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-207ENST00000588542 INAVAQ3KP66 663 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 PRRT3Q5FWE3 981 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 RD3Q7Z3Z2 195 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 LINC00523Q86TU6 105 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 TRAM1L1Q8N609 369 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 OR52K1Q8NGK4 314 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 LMX1AQ8TE12 382 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 ZSCAN5AQ9BUG6 496 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 IL26Q9NPH9 171 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.07■□□□□ 0.8
DDX39A-207ENST00000588542 SPASTQ9UBP0 616 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 TMPRSS11EQ9UL52 423 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 SLC17A4Q9Y2C5 497 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 CSNK1G3Q9Y6M4 447 aa20.07■□□□□ 0.8
DDX39A-207ENST00000588542 GOLGA6L10A0A0M3HER8 536 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 C2orf81A6NN90 581 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 E7EVH7 732 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 TRIM38O00635 465 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 LDB2O43679 373 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 TNFP01375 233 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 APRTP07741 180 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 CELA2BP08218 269 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-207ENST00000588542 FNTAP49354 379 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 TRIP6Q15654 476 aaKnown RBP20.06■□□□□ 0.8
DDX39A-207ENST00000588542 PDPK2PQ6A1A2 396 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 GLRX5Q86SX6 157 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 OR4C6Q8NH72 309 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 SCARF2Q96GP6 870 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-207ENST00000588542 CYP4F12Q9HCS2 524 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 TMEM98Q9Y2Y6 226 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 PKP3Q9Y446 797 aa20.06■□□□□ 0.8
DDX39A-207ENST00000588542 SPAARA0A1B0GVQ0 90 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 STX7O15400 261 aaKnown RBP20.05■□□□□ 0.8
DDX39A-207ENST00000588542 FFAR2O15552 330 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 PPFIA2O75334 1257 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 CRTAMO95727 393 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 KRT14P02533 472 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 SPAM1P38567 509 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 LMAN1P49257 510 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 ZNF140P52738 457 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-207ENST00000588542 ATP13A5Q4VNC0 1218 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 ZDHHC20Q5W0Z9 365 aa20.05■□□□□ 0.8
DDX39A-207ENST00000588542 DOK6Q6PKX4 331 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms