RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 MRGPRX2Q96LB1 330 aa19.12■□□□□ 0.65
CIRBP-217ENST00000588230 SPATA13Q96N96 652 aa19.12■□□□□ 0.65
CIRBP-217ENST00000588230 FSD1LQ9BXM9 530 aa19.12■□□□□ 0.65
CIRBP-217ENST00000588230 USP29Q9HBJ7 922 aa19.12■□□□□ 0.65
CIRBP-217ENST00000588230 ACACAQ13085 2346 aa19.12■□□□□ 0.65
CIRBP-217ENST00000588230 TCRBV7S2A1N4TA0A589 114 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 PRSS38A1L453 326 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 CKMT1AP12532 417 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 MYF5P13349 255 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 SIRPB2Q5JXA9 342 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 GKN2Q86XP6 184 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 CCDC110Q8TBZ0 833 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 GLMNQ92990 594 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 AGAP2Q99490 1192 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 SUDS3Q9H7L9 328 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-217ENST00000588230 RAD18Q9NS91 495 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 NCKIPSDQ9NZQ3 722 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 R3HDM2Q9Y2K5 976 aaKnown RBP19.11■□□□□ 0.65
CIRBP-217ENST00000588230 ZFYVE26Q68DK2 2539 aa19.11■□□□□ 0.65
CIRBP-217ENST00000588230 SRRM3A6NNA2 597 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-217ENST00000588230 SOD1P00441 154 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 CEACAM5P06731 702 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 CELA2BP08218 269 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-217ENST00000588230 HLA-DPA1P20036 260 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 PSMB4P28070 264 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 CHRNA4P43681 627 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 RPIAP49247 311 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 DOK6Q6PKX4 331 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 LVRNQ6Q4G3 990 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 TMC3Q7Z5M5 1100 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 TAF8Q7Z7C8 310 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 TMPRSS12Q86WS5 348 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 SLC13A5Q86YT5 568 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-217ENST00000588230 FAM71DQ8N9W8 422 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 SLC35B2Q8TB61 432 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 EID2BQ96D98 161 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 HIC2Q96JB3 615 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 PPP1R2P1Q96PQ5 205 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 FRMD8Q9BZ67 464 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-217ENST00000588230 CDH19Q9H159 772 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 CARD9Q9H257 536 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 TRABDQ9H4I3 376 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 CARS2Q9HA77 564 aaKnown RBP19.1■□□□□ 0.65
CIRBP-217ENST00000588230 AAR2Q9Y312 384 aaKnown RBP19.1■□□□□ 0.65
CIRBP-217ENST00000588230 SPO11Q9Y5K1 396 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 LRP4O75096 1905 aa19.1■□□□□ 0.65
CIRBP-217ENST00000588230 ITPR1Q14643 2758 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 C5orf60A6NFR6 353 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 INPP4BO15327 924 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 POLD2P49005 469 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 E2F1Q01094 437 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 NR0B2Q15466 257 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 SLC1A5Q15758 541 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 C6orf132Q5T0Z8 1188 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 HENMT1Q5T8I9 393 aaKnown RBP19.09■□□□□ 0.65
CIRBP-217ENST00000588230 ALS2CLQ60I27 953 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 ARHGEF18Q6ZSZ5 1173 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 PROSER1Q86XN7 944 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 WDR24Q96S15 920 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 FICDQ9BVA6 458 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 BOCQ9BWV1 1114 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 SPATA16Q9BXB7 569 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 TMEM168Q9H0V1 697 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 HACD3Q9P035 362 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 SLC17A4Q9Y2C5 497 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 TMEM98Q9Y2Y6 226 aa19.09■□□□□ 0.65
CIRBP-217ENST00000588230 CPED1A4D0V7 1026 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 ASMTLO95671 621 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 AGTP01019 485 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 FGF1P05230 155 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 GNPDA1P46926 289 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 HES3Q5TGS1 186 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 TRIM74Q86UV6 250 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 GPR26Q8NDV2 337 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 MDM1Q8TC05 714 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 BLOC1S5Q8TDH9 187 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 ATG4AQ8WYN0 398 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 LRRC45Q96CN5 670 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 GORASP1Q9BQQ3 440 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 TMEM121Q9BTD3 319 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 FRMD8P1Q9BZ68 369 aaPredicted RBP19.08■□□□□ 0.64
CIRBP-217ENST00000588230 GULP1Q9UBP9 304 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 DKK4Q9UBT3 224 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 SUFUQ9UMX1 484 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 GPR34Q9UPC5 381 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 ASXL3Q9C0F0 2248 aa19.08■□□□□ 0.64
CIRBP-217ENST00000588230 AURKAO14965 403 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 FUCA1P04066 466 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 IVLP07476 585 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 DCDC1P59894 354 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 INSM1Q01101 510 aaPredicted RBP19.07■□□□□ 0.64
CIRBP-217ENST00000588230 ILF3Q12906 894 aaKnown RBP eCLIP19.07■□□□□ 0.64
CIRBP-217ENST00000588230 SLC35F3Q8IY50 421 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 FAM46DQ8NEK8 389 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 COX14Q96I36 57 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 TLR10Q9BXR5 811 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 TRNAU1APQ9NX07 287 aaKnown RBP19.07■□□□□ 0.64
CIRBP-217ENST00000588230 SIRPGQ9P1W8 387 aa19.07■□□□□ 0.64
CIRBP-217ENST00000588230 MYLKQ15746 1914 aa19.06■□□□□ 0.64
CIRBP-217ENST00000588230 COL27A1Q8IZC6 1860 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms