RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PNPLA1Q8N8W4 532 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 GPR26Q8NDV2 337 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 OR1E3Q8WZA6 343 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 EID2BQ96D98 161 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 PDXPQ96GD0 296 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 SCARF2Q96GP6 870 aaPredicted RBP10.05□□□□□ -0.8
TPM4-207ENST00000588032 COX14Q96I36 57 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 PBKQ96KB5 322 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 PLEKHG4BQ96PX9 1271 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 WDR24Q96S15 920 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 BOCQ9BWV1 1114 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 CLPBQ9H078 707 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 RMI1Q9H9A7 625 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 CYP4F12Q9HCS2 524 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 VPS18Q9P253 973 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 MOSPD1Q9UJG1 213 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 ZNF148Q9UQR1 794 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 DRG1Q9Y295 367 aaKnown RBP10.05□□□□□ -0.8
TPM4-207ENST00000588032 PKP3Q9Y446 797 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 NEUROG3Q9Y4Z2 214 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 KNL1Q8NG31 2342 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 LRRK1Q38SD2 2015 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 EME2A4GXA9 379 aaPredicted RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 C2orf81A6NN90 581 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 ERI2A8K979 691 aaKnown RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 GPR89AB7ZAQ6 455 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 F5H423 210 aaPredicted RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 HYAL3O43820 417 aaPredicted RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 KIF5CO60282 957 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 CEP104O60308 925 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 CRTAMO95727 393 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 FGGP02679 453 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 GPR89BP0CG08 455 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 BPIP17213 487 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 CHRNA4P43681 627 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 ILF3Q12906 894 aaKnown RBP eCLIP10.04□□□□□ -0.8
TPM4-207ENST00000588032 DNAJC3Q13217 504 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 NR0B2Q15466 257 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 TAF1AQ15573 450 aaPredicted RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 OASLQ15646 514 aaKnown RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 SMAD1Q15797 465 aaKnown RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 LONRF2Q1L5Z9 754 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 OGFOD3Q6PK18 319 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 C4orf22Q6V702 233 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 TMPRSS7Q7RTY8 843 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 GLT6D1Q7Z4J2 308 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 TAF8Q7Z7C8 310 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 LINC00523Q86TU6 105 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 TMPRSS12Q86WS5 348 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 OR6C4Q8NGE1 309 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 BRSK1Q8TDC3 778 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 BLOC1S5Q8TDH9 187 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 GPBAR1Q8TDU6 330 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 NAT6Q93015 286 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 NAP1L3Q99457 506 aaPredicted RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 AGAP2Q99490 1192 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 GORASP1Q9BQQ3 440 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 FICDQ9BVA6 458 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 SCNM1Q9BWG6 230 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 SPATA16Q9BXB7 569 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 GSDMCQ9BYG8 508 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 TMEM168Q9H0V1 697 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 KCNF1Q9H3M0 494 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 LRRC40Q9H9A6 602 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 CARS2Q9HA77 564 aaKnown RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 MRPL40Q9NQ50 206 aaKnown RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 IL17CQ9P0M4 197 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 CNOT6Q9ULM6 557 aaKnown RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 MSRB2Q9Y3D2 182 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 SPO11Q9Y5K1 396 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 CABIN1Q9Y6J0 2220 aa10.04□□□□□ -0.8
TPM4-207ENST00000588032 TP53BP1Q12888 1972 aaPredicted RBP10.04□□□□□ -0.8
TPM4-207ENST00000588032 FADS2P1A8MWK0 482 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 AURKAO14965 403 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 INPP4BO15327 924 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 STX7O15400 261 aaKnown RBP10.03□□□□□ -0.8
TPM4-207ENST00000588032 SLC25A14O95258 325 aaPredicted RBP10.03□□□□□ -0.8
TPM4-207ENST00000588032 METTL18O95568 372 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 ASMTLO95671 621 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 FUCA1P04066 466 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 LPOP22079 712 aaPredicted RBP10.03□□□□□ -0.8
TPM4-207ENST00000588032 FDFT1P37268 417 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 GNPDA1P46926 289 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 GDF10P55107 478 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 LRP8Q14114 963 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 PYCR3Q53H96 274 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 CCDC157Q569K6 752 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 ZNF569Q5MCW4 686 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 KCTD11Q693B1 232 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 DHRS13Q6UX07 377 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 TTC30BQ8N4P2 665 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 ARL10Q8N8L6 244 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 CCDC89Q8N998 374 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 FAM46DQ8NEK8 389 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 WDR48Q8TAF3 677 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 ATG4AQ8WYN0 398 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 GLYATL1Q969I3 302 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 VPS35Q96QK1 796 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 OR2M4Q96R27 311 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms