RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 BRAT1Q6PJG6 821 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 ZNF852Q6ZMS4 543 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 ASB18Q6ZVZ8 466 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 PCGF1Q9BSM1 259 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 POLR3CQ9BUI4 534 aaPredicted RBP4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 BRF2Q9HAW0 419 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 SLC6A13Q9NSD5 602 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 HAO1Q9UJM8 370 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 DLGAP4Q9Y2H0 992 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 OR2W1Q9Y3N9 320 aa4.26□□□□□ -1.73
CACNA1A-208ENST00000587451 EIF3CLB5ME19 914 aaKnown RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 VCYO14598 125 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 LDLRAD4O15165 306 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 NCAM2O15394 837 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 PAK4O96013 591 aaPredicted RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 HOXC9P31274 260 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 HSD17B4P51659 736 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 ATP12AP54707 1039 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 TAS2R38P59533 333 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 ERVK11-1P61568 191 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 PMP22Q01453 160 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 GRIK2Q13002 908 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 MAD2L1Q13257 205 aaPredicted RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 DCTN2Q13561 401 aaKnown RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 FGFBP1Q14512 234 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 SIRPB2Q5JXA9 342 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 PLEKHM3Q6ZWE6 761 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 HAPLN4Q86UW8 402 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 KLHDC8BQ8IXV7 354 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 CIARTQ8N365 385 aaPredicted RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 HTRA1Q92743 480 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 TAAR8Q969N4 342 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 BARHL1Q9BZE3 327 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 UPF2Q9HAU5 1272 aaKnown RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 ACSS1Q9NUB1 689 aaPredicted RBP4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 HCFC1R1Q9NWW0 138 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 POLG2Q9UHN1 485 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 CAMK2AQ9UQM7 478 aa4.25□□□□□ -1.73
CACNA1A-208ENST00000587451 ZG16O60844 167 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 CAVIN2O95810 425 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 CFC1BP0CG36 223 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 CFC1P0CG37 223 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 FAM106CPP0CH98 169 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 KRT10P13645 584 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 ZNF182P17025 639 aaPredicted RBP4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 ZNF23P17027 643 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 TIMP3P35625 211 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 VEGFCP49767 419 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 ISL1P61371 349 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 PLIN5Q00G26 463 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 PTP4A2Q12974 167 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 COL28A1Q2UY09 1125 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 ARMC8Q8IUR7 673 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 EPHX4Q8IUS5 362 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 GTF3C6Q969F1 213 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 SCRN2Q96FV2 425 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 TMEM68Q96MH6 324 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 GLIS2Q9BZE0 524 aaPredicted RBP4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 SLC25A18Q9H1K4 315 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 KIF9Q9HAQ2 790 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 SCRT2Q9NQ03 307 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 LUZP4Q9P127 313 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 FBXL2Q9UKC9 423 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 ARHGAP26Q9UNA1 814 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 CYP46A1Q9Y6A2 500 aa4.24□□□□□ -1.73
CACNA1A-208ENST00000587451 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 SEC31AO94979 1220 aaKnown RBP4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 F9P00740 461 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 INHBAP08476 426 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 PAX1P15863 534 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 UBA1P22314 1058 aaKnown RBP4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 OLIG2Q13516 323 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 DHX8Q14562 1220 aaKnown RBP4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 DECR1Q16698 335 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 PRICKLE4Q2TBC4 344 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 STXBP5Q5T5C0 1151 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 SLC35E4Q6ICL7 350 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 OR7E24Q6IFN5 339 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 DPPA4Q7L190 304 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 OR10V1Q8NGI7 309 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 ST8SIA4Q92187 359 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 SMARCE1Q969G3 411 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 ALG14Q96F25 216 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 ACOX2Q99424 681 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 RBM4Q9BWF3 364 aaKnown RBP4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 USP44Q9H0E7 712 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 SLC28A3Q9HAS3 691 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 ACSL5Q9ULC5 683 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 KLHL20Q9Y2M5 609 aa4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 LRRFIP2Q9Y608 721 aaKnown RBP4.23□□□□□ -1.73
CACNA1A-208ENST00000587451 A0A1W2PQM1 296 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 PMS2P5A8MQ11 134 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 SNAP23O00161 211 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 TNFSF14O43557 240 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 SYNGR3O43761 229 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 PCDH7O60245 1069 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 APOHP02749 345 aaPredicted RBP4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 AMBPP02760 352 aa4.22□□□□□ -1.73
CACNA1A-208ENST00000587451 ABCD3P28288 659 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms