RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MSANTD2Q6P1R3 559 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 EPHX4Q8IUS5 362 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 PGBD5Q8N414 524 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 GPR150Q8NGU9 434 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 TRPC4APQ8TEL6 797 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 LRRC58Q96CX6 371 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 FEM1CQ96JP0 617 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 NSUN5Q96P11 429 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 GID8Q9NWU2 228 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 CMTM6Q9NX76 183 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 TUBA8Q9NY65 449 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 CIDEBQ9UHD4 219 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 TTC3P53804 2025 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 HTTP42858 3142 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 GOT2P00505 430 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 LBPP18428 481 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 FASP25445 335 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 YBX1P67809 324 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 CAPRIN1Q14444 709 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 MS4A13Q5J8X5 152 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 MRNIPQ6NTE8 343 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 ZNF598Q86UK7 904 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 MON1AQ86VX9 555 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 DIS3LQ8TF46 1054 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 TUBGCP3Q96CW5 907 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 KCNA7Q96RP8 456 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 ATOH8Q96SQ7 321 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 CYP2S1Q96SQ9 504 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 POPDC3Q9HBV1 291 aa16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 PTBP2Q9UKA9 531 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-205ENST00000587327 FAM149AA5PLN7 773 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 TMEM88BA6NKF7 163 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 TRIM64CA6NLI5 447 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 C9JVG2 144 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 H3BMM5 538 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 HGFP14210 728 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 UGT1A6P19224 532 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 MYF6P23409 242 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 RPL10P27635 214 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 EMP3P54852 163 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 TBC1D25Q3MII6 688 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 SPATS1Q496A3 300 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 COQ5Q5HYK3 327 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 IL31Q6EBC2 164 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 BLOC1S3Q6QNY0 202 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 ZNF354CQ86Y25 554 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 SCN4BQ8IWT1 228 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 PEX13Q92968 403 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 CENPNQ96H22 339 aaPredicted RBP16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 SUSD3Q96L08 255 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 MYRFLQ96LU7 910 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 BIRC8Q96P09 236 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 TFB2MQ9H5Q4 396 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 LIN28AQ9H9Z2 209 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 SLC52A3Q9NQ40 469 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.8■□□□□ 0.288e-6■■□□□ 11.8
PRKCSH-205ENST00000587327 POLG2Q9UHN1 485 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 ABT1Q9ULW3 272 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 ARL5AQ9Y689 179 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
PRKCSH-205ENST00000587327 A0A087WXM4 84 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 B4GALT3O60512 393 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 LINC00032P0C843 101 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 IDO1P14902 403 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 PAX3P23760 479 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 TBX4P57082 545 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 MERTKQ12866 999 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 SEMA3AQ14563 771 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 PTPRCAPQ14761 206 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 RPS6KA2Q15349 733 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 FAM26DQ5JW98 314 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 CMTR2Q8IYT2 770 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 ADI1Q9BV57 179 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 SCML2Q9UQR0 700 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 PCDHA9Q9Y5H5 950 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 IGLV3-10A0A075B6K4 115 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 RNF103-CHMP3A0A140T963 221 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 CCDC162PA2VCL2 907 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 ARPC2O15144 300 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 OR4Q2P0C623 313 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 GFAPP14136 432 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 CHRM3P20309 590 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 OXTRP30559 389 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 ETFBP38117 255 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 CCT8P50990 548 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 YWHAHQ04917 246 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 FOXM1Q08050 763 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 TTC33Q6PID6 262 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 ADGRG5Q8IZF4 528 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 ZNF786Q8N393 782 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 TNIP2Q8NFZ5 429 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 BLOC1S5Q8TDH9 187 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 ADAMTS16Q8TE57 1224 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 C9orf16Q9BUW7 83 aa16.79■□□□□ 0.28
PRKCSH-205ENST00000587327 TRIM64A6NGJ6 449 aa16.78■□□□□ 0.28
PRKCSH-205ENST00000587327 TPST1O60507 370 aa16.78■□□□□ 0.28
PRKCSH-205ENST00000587327 VPS4BO75351 444 aa16.78■□□□□ 0.28
PRKCSH-205ENST00000587327 GJB3O75712 270 aa16.78■□□□□ 0.28
PRKCSH-205ENST00000587327 PYGLP06737 847 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms