RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PSMD3O43242 534 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ATP9BO43861 1147 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 MFSD11O43934 449 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 LRIG2O94898 1065 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 PCDH8O95206 1070 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ACSL3O95573 720 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 CDK4P11802 303 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 CKMT1AP12532 417 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SRCP12931 536 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ERCC2P18074 760 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 AMPD1P23109 780 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 RBL1P28749 1068 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 STX2P32856 288 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 NNMTP40261 264 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 LMAN1P49257 510 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 GDF10P55107 478 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SKOR1P84550 965 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 NFKB2Q00653 900 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 GBE1Q04446 702 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 PPIDQ08752 370 aaKnown RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 GALNT2Q10471 571 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 AP1B1Q10567 949 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ILKQ13418 452 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SEMA5AQ13591 1074 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 DEFB133Q30KQ1 61 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 CCDC38Q502W7 563 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SETMARQ53H47 684 aaPredicted RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 RAB6CQ53S08 254 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ALFQ53S48 1182 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 GUSBP11Q6P575 273 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 NPNTQ6UXI9 565 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 Q6ZSR6 202 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 PTAR1Q7Z6K3 402 aaPredicted RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 TDRPQ86YL5 185 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ZBED8Q8IZ13 594 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 OXR1Q8N573 874 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SH2D3CQ8N5H7 860 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ATPAF2Q8N5M1 289 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ZNF248Q8NDW4 579 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 IFI44Q8TCB0 444 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 KCNE4Q8WWG9 221 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 TTC9Q92623 222 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 FATE1Q969F0 183 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 FEM1AQ9BSK4 669 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SIK2Q9H0K1 926 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 RAB6CQ9H0N0 254 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 TCEAL2Q9H3H9 227 aaPredicted RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 CENPHQ9H3R5 247 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 SAYSD1Q9NPB0 183 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 ASCL3Q9NQ33 180 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 NINJ2Q9NZG7 142 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 PPARGC1AQ9UBK2 798 aaKnown RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 SLC24A2Q9UI40 661 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 GGT7Q9UJ14 662 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 VPS28Q9UK41 221 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 PNMA8BQ9ULN7 279 aaPredicted RBP7.86□□□□□ -1.15
VMP1-204ENST00000587259 OR51B4Q9Y5P0 310 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 HS3ST4Q9Y661 456 aa7.86□□□□□ -1.15
VMP1-204ENST00000587259 A0A0D9SEW6 157 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 EXOC1LA0A1B0GW35 172 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TCAF2A6NFQ2 919 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 WASH4PA8MWX3 477 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 C1QTNF3-AMACRE9PGA6 284 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 SCAMP1O15126 338 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 SLC7A4O43246 635 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 SPINT1O43278 529 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PAGE1O75459 146 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 APRTP07741 180 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 ZSCAN5DPP0CG00 497 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 GKP32189 559 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 GARSP41250 739 aaKnown RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 NDST2P52849 883 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PLK1P53350 603 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TMPRSS3P57727 454 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PPP2R2AP63151 447 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 E2F1Q01094 437 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PDIA2Q13087 525 aaKnown RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 C1orf61Q13536 156 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 FZD2Q14332 565 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PRPSAP1Q14558 356 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TERF2Q15554 542 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PARP6Q2NL67 630 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TTMPQ5BVD1 217 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 LRRC73Q5JTD7 316 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PERM1Q5SV97 790 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 MANEALQ5VSG8 457 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TTC39BQ5VTQ0 682 aaPredicted RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 FAM46CQ5VWP2 391 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 RWDD4Q6NW29 188 aaKnown RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 LEKR1Q6ZMV7 388 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TFAP2DQ7Z6R9 452 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 IQCHQ86VS3 1027 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 HORMAD1Q86X24 394 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PALM2Q8IXS6 379 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 CCDC13Q8IYE1 715 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 RBFAQ8N0V3 343 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PYROXD2Q8N2H3 581 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 RTL3Q8N8U3 475 aaKnown RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 ZNF557Q8N988 423 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms