RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TTC19Q6DKK2 380 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 PTRHD1Q6GMV3 140 aaKnown RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 LRRC8EQ6NSJ5 796 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 FAM151BQ6UXP7 276 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MICALCLQ6ZW33 695 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 DPPA4Q7L190 304 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ZNF771Q7L3S4 317 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 SLC41A1Q8IVJ1 513 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 DENND6AQ8IWF6 608 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 KIRREL3Q8IZU9 778 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CYP4X1Q8N118 509 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CBARPQ8N350 705 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 AFAP1L2Q8N4X5 818 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ZNF366Q8N895 744 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 BANPQ8N9N5 519 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CHST14Q8NCH0 376 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 RAB3IL1Q8TBN0 382 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 RDH11Q8TC12 318 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 KCNV2Q8TDN2 545 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 GANCQ8TET4 914 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PPP4R1Q8TF05 950 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 HEXDCQ8WVB3 486 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PIH1D2Q8WWB5 315 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SORCS1Q8WY21 1168 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MYLIPQ8WY64 445 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CCDC126Q96EE4 140 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CHMP6Q96FZ7 201 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 DCUN1D1Q96GG9 259 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MRGPRX3Q96LB0 322 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 LRRC3BQ96PB8 259 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 FAM111AQ96PZ2 611 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PANX3Q96QZ0 392 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MCCC1Q96RQ3 725 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 KLF6Q99612 283 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 OMDQ99983 421 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ZSCAN5AQ9BUG6 496 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SPATA16Q9BXB7 569 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 C1QTNF7Q9BXJ2 289 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PLA2G2FQ9BZM2 168 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 FAM107BQ9H098 131 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 EPN3Q9H201 632 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ASB8Q9H765 288 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 UGT1A7Q9HAW7 530 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 UGT1A10Q9HAW8 530 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 UGT1A8Q9HAW9 530 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 BPIFA1Q9NP55 256 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TRPV5Q9NQA5 729 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TAS2R13Q9NYV9 303 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SLC17A6Q9P2U8 582 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 B4GALT6Q9UBX8 382 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 GGT7Q9UJ14 662 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TRMT6Q9UJA5 497 aaKnown RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 SCML1Q9UN30 329 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 NCKAP1Q9Y2A7 1128 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MRPS17Q9Y2R5 130 aaKnown RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 PPIL1Q9Y3C6 166 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PSAT1Q9Y617 370 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 STON1Q9Y6Q2 735 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 WASF2Q9Y6W5 498 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ANKRD12Q6UB98 2062 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 GMNCA6NCL1 334 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 OR51F1A6NGY5 319 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 NPIPB15A6NHN6 443 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 C16orf96A6NNT2 1141 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PRRT4C9JH25 899 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CCL22O00626 93 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PRMT5O14744 637 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 KPNA5O15131 536 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 TRIM24O15164 1050 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 BIRC5O15392 142 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 TYROBPO43914 113 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 LZTS3O60299 673 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 MAGEC1O60732 1142 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ZNF821O75541 412 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 RFPL1O75677 317 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 AHSGP02765 367 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ALDOAP04075 364 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 RBP1P09455 135 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 LTA4HP09960 611 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 OR56A5P0C7T3 313 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MYL2P10916 166 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 SRFP11831 508 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 HLA-EP13747 358 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ADRB3P13945 408 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MSH3P20585 1137 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 C5AR1P21730 350 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 ACRV1P26436 265 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 NTSR1P30989 418 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 FOXN2P32314 431 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 CRHR1P34998 444 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 RPA3P35244 121 aaPredicted RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 MMP12P39900 470 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 SLC26A3P40879 764 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 SKIV2L2P42285 1042 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 IL12RB1P42701 662 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 NSG1P42857 185 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 PRKAA2P54646 552 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 DCDC1P59894 354 aa6.16□□□□□ -1.42
LIG3-206ENST00000586058 MRPS21P82921 87 aaKnown RBP6.16□□□□□ -1.42
LIG3-206ENST00000586058 NFATC2Q13469 925 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms