RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	MATN3	O15232	486 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CLDN7	O95471	211 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CES1	P23141	567 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ANP32A	P39687	249 aa	Known RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	GARS	P41250	739 aa	Known RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ZNF165	P49910	485 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	DSC2	Q02487	901 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	NIPAL4	Q0D2K0	466 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	GALNT2	Q10471	571 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CLCA4	Q14CN2	919 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	IQCB1	Q15051	598 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	PAFAH1B3	Q15102	231 aa	Known RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CCDC122	Q5T0U0	273 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ALG1L	Q6GMV1	187 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TMEM71	Q6P5X7	295 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	NRSN1	Q8IZ57	195 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	EXD1	Q8NHP7	514 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ARRDC2	Q8TBH0	407 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	LRRN4	Q8WUT4	740 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ART4	Q93070	314 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	COL26A1	Q96A83	441 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	WDR24	Q96S15	920 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	DPYSL5	Q9BPU6	564 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	NUP85	Q9BW27	656 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	POLR1E	Q9GZS1	481 aa	Known RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CDH19	Q9H159	772 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	RBM22	Q9NW64	420 aa	Known RBP eCLIP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	OCIAD1	Q9NX40	245 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SLC39A1	Q9NY26	324 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	RCOR3	Q9P2K3	495 aa	Predicted RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	IL17B	Q9UHF5	180 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ANAPC7	Q9UJX3	599 aa		16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	HEMK1	Q9Y5R4	338 aa	Predicted RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	BZW2	Q9Y6E2	419 aa	Known RBP	16.26	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	MYO18B	Q8IUG5	2567 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460		A0A087X0T9	212 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	MYO1F	O00160	1098 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	INPP4B	O15327	924 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SUV39H1	O43463	412 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SERPINC1	P01008	464 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	FAM228B	P0C875	321 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	THRA	P10827	490 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SFTPC	P11686	197 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ZNF30	P17039	623 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CSTF2	P33240	577 aa	Known RBP eCLIP	16.25	■□□□□ 0.19	4e-7	■■■■■ 27.8
PRKAR1A-206	ENST00000585460	UGT1A3	P35503	534 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SSR1	P43307	286 aa	Known RBP	16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	FASLG	P48023	281 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	EPHB1	P54762	984 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ZNF761	Q86XN6	746 aa	Predicted RBP	16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CPNE8	Q86YQ8	564 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SFRP1	Q8N474	314 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SLC37A2	Q8TED4	501 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SYN2	Q92777	582 aa	Predicted RBP	16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TSGA13	Q96PP4	275 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	FUCA2	Q9BTY2	467 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ZNHIT2	Q9UHR6	403 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	PRKAB1	Q9Y478	270 aa		16.25	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CYSRT1	A8MQ03	144 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460		B4E171	279 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	MFSD11	O43934	449 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	DNAJC6	O75061	913 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	MAP3K6	O95382	1288 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ASMTL	O95671	621 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ATP1A1	P05023	1023 aa	Known RBP	16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	PYGL	P06737	847 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CCNC	P24863	283 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	PBX1	P40424	430 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TSPAN7	P41732	249 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CSRP3	P50461	194 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	GPLD1	P80108	840 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	LRP8	Q14114	963 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	DPYSL3	Q14195	570 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TDRD12	Q587J7	1177 aa	Known RBP	16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ANKRD20A8P	Q5CZ79	823 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	NCBP2-AS2	Q69YL0	99 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	IYD	Q6PHW0	289 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	GALNT13	Q8IUC8	556 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	FATE1	Q969F0	183 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SLC38A3	Q99624	504 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	DDA1	Q9BW61	102 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SPRY4	Q9C004	299 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TRIM4	Q9C037	500 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	GEMIN8	Q9NWZ8	242 aa	Known RBP	16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TBC1D29	Q9UFV1	150 aa		16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	OAS3	Q9Y6K5	1087 aa	Known RBP	16.24	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SPTA1	P02549	2419 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460		A0A1W2PQJ5	194 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	EFCAB7	A8K855	629 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	TERT	O14746	1132 aa	Known RBP	16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SERPING1	P05155	500 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	LIF	P15018	202 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	ATP1A2	P50993	1020 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	SLC10A2	Q12908	348 aa	Predicted RBP	16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	NFKBIB	Q15653	356 aa		16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	IFI16	Q16666	785 aa	Known RBP	16.23	■□□□□ 0.19
PRKAR1A-206	ENST00000585460	HADH	Q16836	314 aa	Known RBP	16.23	■□□□□ 0.19

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms