RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 NFKB1P19838 968 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 KELP23276 732 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 BLKP51451 505 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 SRP54P61011 504 aaKnown RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CBX1P83916 185 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CDK3Q00526 305 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 PPARDQ03181 441 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 KLF1Q13351 362 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CAMK2BQ13554 666 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CUL1Q13616 776 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ARHGEF7Q14155 803 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CASP8Q14790 479 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 LLGL1Q15334 1064 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 HENMT1Q5T8I9 393 aaKnown RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 KAZNQ674X7 775 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 KDELC1Q6UW63 502 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 DHRS13Q6UX07 377 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 UNQ6494/PRO21346Q6UXR6 183 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ADAMTSL4Q6UY14 1074 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CCNI2Q6ZMN8 369 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 RFLNAQ6ZTI6 216 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 B4GALNT4Q76KP1 1039 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 HEATR4Q86WZ0 1026 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ZNF567Q8N184 647 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 CACTIN-AS1Q8N1I8 211 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 GALNT15Q8N3T1 639 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 SDR16C5Q8N3Y7 309 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 FSTL5Q8N475 847 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 LPCAT1Q8NF37 534 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 OR56A4Q8NGH8 313 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ATL2Q8NHH9 583 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 SPATA22Q8NHS9 363 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ACTL9Q8TC94 416 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 MAIP1Q8WWC4 291 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 HTR3CQ8WXA8 447 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 OR1E3Q8WZA6 343 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 EID2BQ96D98 161 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 SCARF2Q96GP6 870 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 MS4A14Q96JA4 679 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 AGAP3Q96P47 875 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 KRT12Q99456 494 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 GORASP1Q9BQQ3 440 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 LRRC1Q9BTT6 524 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 FRMD8Q9BZ67 464 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-202ENST00000585437 SLC13A1Q9BZW2 595 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 RAB17Q9H0T7 212 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 ABCG8Q9H221 673 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 NCKIPSDQ9NZQ3 722 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 SPASTQ9UBP0 616 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 KLQ9UEF7 1012 aa8.61□□□□□ -1.03
ATG4D-202ENST00000585437 C1orf232A0A0U1RR37 186 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 LOC285095A0A1B0GVY8 99 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 PRSS38A1L453 326 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 TMEM8BA6NDV4 472 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 CACNB4O00305 520 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 SASH3O75995 380 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 CLDN7O95471 211 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 NDST3O95803 873 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 FUCA1P04066 466 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 CEACAM5P06731 702 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 PYGLP06737 847 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 PROS1P07225 676 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 CELA2BP08218 269 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 PYGMP11217 842 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 EPHB1P54762 984 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 DCDC1P59894 354 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 OTUD4Q01804 1114 aaKnown RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 CDK18Q07002 472 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 GALNT3Q14435 633 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 ELOCQ15369 112 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 DEFB133Q30KQ1 61 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 FAXCQ5TGI0 409 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 AADACL2Q6P093 401 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 LVRNQ6Q4G3 990 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 ENPP7Q6UWV6 458 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 ZC3H18Q86VM9 953 aaKnown RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 TMPRSS12Q86WS5 348 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 HID1Q8IV36 788 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 KLHDC8BQ8IXV7 354 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 SLC35F3Q8IY50 421 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 NRSN1Q8IZ57 195 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 KDF1Q8NAX2 398 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 LMX1AQ8TE12 382 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 AENQ8WTP8 325 aaKnown RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 CAVIN3Q969G5 261 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 HAUS1Q96CS2 278 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 AP2M1Q96CW1 435 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 OXNAD1Q96HP4 312 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 COX14Q96I36 57 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 FCRL5Q96RD9 977 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 MLPHQ9BV36 600 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 HEMGNQ9BXL5 484 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 ADGRE3Q9BY15 652 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 MAGEE1Q9HCI5 957 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms