RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 NUMA1Q14980 2115 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 TTC28Q96AY4 2481 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 TMEM221A6NGB7 291 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 POC1B-GALNT4F8VUJ3 575 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 K7ESF4 209 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 M0R296 226 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 UGT1A9O60656 530 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 MMP20O60882 483 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 ZNF217O75362 1048 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 TM7SF2O76062 418 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 INHBAP08476 426 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 ITGALP20701 1170 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 OXTRP30559 389 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 HOXA6P31267 233 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 MSH2P43246 934 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 CXCL12P48061 93 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 LEPRP48357 1165 aaKnown RBP16.06■□□□□ 0.16
SS18-226ENST00000585241 RPS21P63220 83 aaKnown RBP16.06■□□□□ 0.16
SS18-226ENST00000585241 ILF2Q12905 390 aaKnown RBP16.06■□□□□ 0.16
SS18-226ENST00000585241 NFATC2Q13469 925 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 SEMA3AQ14563 771 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 ACOX1Q15067 660 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 CHRNA6Q15825 494 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 FASTKD1Q53R41 847 aaKnown RBP16.06■□□□□ 0.16
SS18-226ENST00000585241 AARS2Q5JTZ9 985 aaKnown RBP16.06■□□□□ 0.16
SS18-226ENST00000585241 PSAPL1Q6NUJ1 521 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 FAM151BQ6UXP7 276 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 TRIM69Q86WT6 500 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 DENND6AQ8IWF6 608 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 PIANPQ8IYJ0 282 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 OR2T34Q8NGX1 318 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 OR14C36Q8NHC7 312 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 RUFY1Q96T51 708 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 C1QTNF2Q9BXJ5 285 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 BTBD1Q9H0C5 482 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 UGT1A7Q9HAW7 530 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 UGT1A10Q9HAW8 530 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 UGT1A8Q9HAW9 530 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 BCCIPQ9P287 314 aaKnown RBP eCLIP16.06■□□□□ 0.16
SS18-226ENST00000585241 SLC30A1Q9Y6M5 507 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 TRPM6Q9BX84 2022 aa16.06■□□□□ 0.16
SS18-226ENST00000585241 PI15O43692 258 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 LZTS3O60299 673 aaPredicted RBP16.05■□□□□ 0.16
SS18-226ENST00000585241 PCDH8O95206 1070 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 TEAD1P28347 426 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 GABRB3P28472 473 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 SERPINB9P50453 376 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 CTBP1Q13363 440 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 ITGA9Q13797 1035 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 SMAD1Q15797 465 aaKnown RBP16.05■□□□□ 0.16
SS18-226ENST00000585241 KRT71Q3SY84 523 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 TNFAIP8L3Q5GJ75 292 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 GRTP1Q5TC63 336 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 CERS6Q6ZMG9 384 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 HORMAD1Q86X24 394 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 ZNF398Q8TD17 642 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 SCAMP4Q969E2 229 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.05■□□□□ 0.16
SS18-226ENST00000585241 NUS1Q96E22 293 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 PGM2Q96G03 612 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 VPS35Q96QK1 796 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 RBBP8Q99708 897 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 RIOK2Q9BVS4 552 aaKnown RBP16.05■□□□□ 0.16
SS18-226ENST00000585241 PRMT8Q9NR22 394 aaPredicted RBP16.05■□□□□ 0.16
SS18-226ENST00000585241 INTS10Q9NVR2 710 aaKnown RBP16.05■□□□□ 0.16
SS18-226ENST00000585241 COQ6Q9Y2Z9 468 aa16.05■□□□□ 0.16
SS18-226ENST00000585241 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 A0A1W2PQU0 124 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 IGLON5A6NGN9 336 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 RNGTTO60942 597 aaKnown RBP16.04■□□□□ 0.16
SS18-226ENST00000585241 S1PR4O95977 384 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 SOD1P00441 154 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 AHSGP02765 367 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 PRSS56P0CW18 603 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 CNTFP26441 200 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 ACSL1P33121 698 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 CA5AP35218 305 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 SLCO1A2P46721 670 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 TTPAP49638 278 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 CDKN1CP49918 316 aaPredicted RBP16.04■□□□□ 0.16
SS18-226ENST00000585241 LIMK2P53671 638 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 MPP1Q00013 466 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 FGL2Q14314 439 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 ZNF284Q2VY69 593 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 ZRANB3Q5FWF4 1079 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 RNF187Q5TA31 235 aaPredicted RBP16.04■□□□□ 0.16
SS18-226ENST00000585241 LYPLAL1Q5VWZ2 237 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 SEL1L3Q68CR1 1132 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 STRA8Q7Z7C7 330 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 SDCCAG8Q86SQ7 713 aaPredicted RBP16.04■□□□□ 0.16
SS18-226ENST00000585241 ZC3HC1Q86WB0 502 aaKnown RBP16.04■□□□□ 0.16
SS18-226ENST00000585241 PGBD3Q8N328 593 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 MZB1Q8WU39 189 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 ULK4Q96C45 1275 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 AP2M1Q96CW1 435 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 RHOJQ9H4E5 214 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 ASB8Q9H765 288 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 TMBIM4Q9HC24 238 aa16.04■□□□□ 0.16
SS18-226ENST00000585241 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms