RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 DTX3LQ8TDB6 740 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 ATG4AQ8WYN0 398 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 APOLD1Q96LR9 279 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 PLEKHG4BQ96PX9 1271 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 GPR63Q9BZJ6 419 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 ARNT2Q9HBZ2 717 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 MRPL40Q9NQ50 206 aaKnown RBP16.17■□□□□ 0.18
ERBB2-222ENST00000584908 NCKIPSDQ9NZQ3 722 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 CNOT6Q9ULM6 557 aaKnown RBP16.17■□□□□ 0.18
ERBB2-222ENST00000584908 NEUROG3Q9Y4Z2 214 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 KNTC1P50748 2209 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 GOLGA6CA6NDK9 693 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 GOLGA6BA6NDN3 693 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 FADS2P1A8MWK0 482 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 YY2O15391 372 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 RFPL3O75679 317 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 AGTP01019 485 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 ANXA6P08133 673 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 CELA2BP08218 269 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-222ENST00000584908 GOLGA6DP0CG33 693 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 CTSEP14091 401 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 MSLNQ13421 630 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-222ENST00000584908 C1orf61Q13536 156 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 CCNG2Q16589 344 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 DEFB133Q30KQ1 61 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 P3H1Q32P28 736 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 C6orf132Q5T0Z8 1188 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 ARHGEF18Q6ZSZ5 1173 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 GKN2Q86XP6 184 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 CHCHD4Q8N4Q1 142 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 SLC25A41Q8N5S1 370 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 MAIP1Q8WWC4 291 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 ZSCAN5AQ9BUG6 496 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 FICDQ9BVA6 458 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 SCNM1Q9BWG6 230 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 TRNAU1APQ9NX07 287 aaKnown RBP16.16■□□□□ 0.18
ERBB2-222ENST00000584908 GOLGA6AQ9NYA3 693 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 VPS18Q9P253 973 aa16.16■□□□□ 0.18
ERBB2-222ENST00000584908 HYAL3O43820 417 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 PPFIA2O75334 1257 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 TOP3BO95985 862 aaKnown RBP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 GP1BAP07359 652 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 BPIP17213 487 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 DUSP3P51452 185 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 GSE1Q14687 1217 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 SMAD1Q15797 465 aaKnown RBP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 ZDHHC20Q5W0Z9 365 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 DENND5AQ6IQ26 1287 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 TMPRSS7Q7RTY8 843 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 RD3Q7Z3Z2 195 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 TRAM1L1Q8N609 369 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 GPBAR1Q8TDU6 330 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 C1orf54Q8WWF1 131 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 C19orf43Q9BQ61 176 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 TMEM168Q9H0V1 697 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 CYP4F12Q9HCS2 524 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 IL17CQ9P0M4 197 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 FEZ2Q9UHY8 353 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 SUFUQ9UMX1 484 aa16.15■□□□□ 0.18
ERBB2-222ENST00000584908 DRG1Q9Y295 367 aaKnown RBP16.15■□□□□ 0.18
ERBB2-222ENST00000584908 RP1P56715 2156 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 MYLKQ15746 1914 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 METTL18O95568 372 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 FGGP02679 453 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 RASGEF1CQ8N431 466 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 PTCD2Q8WV60 388 aaKnown RBP16.14■□□□□ 0.17
ERBB2-222ENST00000584908 SCG3Q8WXD2 468 aaKnown RBP16.14■□□□□ 0.17
ERBB2-222ENST00000584908 TBL1YQ9BQ87 522 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
ERBB2-222ENST00000584908 EVA1BQ9NVM1 165 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 TTC7AQ9ULT0 858 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-222ENST00000584908 MSRB2Q9Y3D2 182 aa16.14■□□□□ 0.17
ERBB2-222ENST00000584908 COL27A1Q8IZC6 1860 aaPredicted RBP16.13■□□□□ 0.17
ERBB2-222ENST00000584908 EME2A4GXA9 379 aaPredicted RBP16.13■□□□□ 0.17
ERBB2-222ENST00000584908 PSMD3O43242 534 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 POLD2P49005 469 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 DAB2P98082 770 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 OLIG2Q13516 323 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 OGFOD3Q6PK18 319 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 GLT6D1Q7Z4J2 308 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 TRIM74Q86UV6 250 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 NRROSQ86YC3 692 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 SLC35F3Q8IY50 421 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 CACTIN-AS1Q8N1I8 211 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 GALNT15Q8N3T1 639 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 BLOC1S5Q8TDH9 187 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 GLMNQ92990 594 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 LRRC45Q96CN5 670 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 PBKQ96KB5 322 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 VPS35Q96QK1 796 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 SPATA16Q9BXB7 569 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 LRRC40Q9H9A6 602 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 KLK13Q9UKR3 277 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 ZNF148Q9UQR1 794 aa16.13■□□□□ 0.17
ERBB2-222ENST00000584908 OAS3Q9Y6K5 1087 aaKnown RBP16.13■□□□□ 0.17
ERBB2-222ENST00000584908 ERI2A8K979 691 aaKnown RBP16.12■□□□□ 0.17
ERBB2-222ENST00000584908 GPR89AB7ZAQ6 455 aa16.12■□□□□ 0.17
ERBB2-222ENST00000584908 INPP4BO15327 924 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms