RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 AKR1B1P15121 316 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 UBA1P22314 1058 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ACSL1P33121 698 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 SLC15A1P46059 708 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 RFX2P48378 723 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 NUDT6P53370 316 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 MFAP4P55083 255 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 TAS2R40P59535 323 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ECT2LQ008S8 904 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 IRF3Q14653 427 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 CDONQ4KMG0 1287 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 FSCBQ5H9T9 825 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 PMS2CLQ68D20 193 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 GPR139Q6DWJ6 353 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 SIGIRRQ6IA17 410 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 KIAA0930Q6ICG6 404 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 Q6ZTK2 550 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ADGRA1Q86SQ6 560 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 MCEMP1Q8IX19 187 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 DSELQ8IZU8 1212 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 PELI3Q8N2H9 469 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 AADATQ8N5Z0 425 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 POC5Q8NA72 575 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ZNF548Q8NEK5 533 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ARRDC2Q8TBH0 407 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 GPT2Q8TD30 523 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 TRPC4APQ8TEL6 797 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 PRPF31Q8WWY3 499 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ERGIC1Q969X5 290 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ELMOD3Q96FG2 381 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 LRFN5Q96NI6 719 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 OR2A14Q96R47 310 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 NUDCD1Q96RS6 583 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 ACOX2Q99424 681 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 SLF1Q9BQI6 1058 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 TMEM204Q9BSN7 226 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 MXD3Q9BW11 206 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 SIL1Q9H173 461 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 NDST4Q9H3R1 872 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 MAGIXQ9H6Y5 334 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 SLC28A3Q9HAS3 691 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 CLK4Q9HAZ1 481 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 LTB4R2Q9NPC1 389 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 GPR108Q9NPR9 543 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 PSD3Q9NYI0 1048 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 MARCH4Q9P2E8 410 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 COPG2Q9UBF2 871 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 SEC63Q9UGP8 760 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 FZD10Q9ULW2 581 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 EXO1Q9UQ84 846 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 CMAHPQ9Y471 501 aa3.77□□□□□ -1.81
SMCHD1-209ENST00000583441 IGHV4-28A0A0C4DH34 117 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 A0A1B0GVM2 712 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 LRRC72A6NJI9 287 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 GLOD5A6NK44 160 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 VCYO14598 125 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 OGG1O15527 345 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 TPPPO94811 219 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 PGM3O95394 542 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 VNN2O95498 520 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 FTCDO95954 541 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 FGF2P09038 288 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 RRM1P23921 792 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 KRT20P35900 424 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 RPL3P39023 403 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 THPOP40225 353 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 NRIP1P48552 1158 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 MRPS5P82675 430 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 PPATQ06203 517 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 BECN1Q14457 450 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 MMEL1Q495T6 779 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 EFHC1Q5JVL4 640 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 NAA16Q6N069 864 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 SLC30A6Q6NXT4 461 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 CFAP77Q6ZQR2 320 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 Q6ZSV7 163 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 ZNF367Q7RTV3 350 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 TSPAN33Q86UF1 283 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 HAPLN4Q86UW8 402 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 ARID3BQ8IVW6 561 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 CCDC13Q8IYE1 715 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 SPATA6LQ8N4H0 392 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 MIGA1Q8NAN2 632 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 OR14L1PQ8NHC6 308 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 ZKSCAN4Q969J2 545 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 IGSF8Q969P0 613 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 RBM38Q9H0Z9 239 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 OSGEPL1Q9H4B0 414 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 ESRP2Q9H6T0 727 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 SLC35C2Q9NQQ7 365 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 SETD4Q9NVD3 440 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 HIF1ANQ9NWT6 349 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 RCOR1Q9UKL0 485 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 TTC7AQ9ULT0 858 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 NENFQ9UMX5 172 aa3.76□□□□□ -1.81
SMCHD1-209ENST00000583441 A0A087WYN8 130 aa3.75□□□□□ -1.81
SMCHD1-209ENST00000583441 OR6C75A6NL08 312 aa3.75□□□□□ -1.81
SMCHD1-209ENST00000583441 ERI2A8K979 691 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms