RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 WSB2Q9NYS7 404 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IL1RAPL1Q9NZN1 696 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NFKBIL1Q9UBC1 381 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 APPL1Q9UKG1 709 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CYP8B1Q9UNU6 501 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 COQ6Q9Y2Z9 468 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NUMA1Q14980 2115 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 A0A1W2PQU0 124 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 OR51F1A6NGY5 319 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LRRC72A6NJI9 287 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FAM159BA6NKW6 160 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GOLGA8KD6RF30 607 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GOLGA8TH3BQL2 631 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GAPDHSO14556 408 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LILRB5O75023 590 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NUDT17P0C025 328 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CD6P30203 668 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 MC4RP32245 332 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 DCDC1P59894 354 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CASP8Q14790 479 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 AGERQ15109 404 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HSP90AA5PQ58FG0 334 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TEDDM1Q5T9Z0 273 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SEL1L3Q68CR1 1132 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NEPROQ6NW34 567 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 AFTPHQ6ULP2 937 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 MICALCLQ6ZW33 695 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PTAR1Q7Z6K3 402 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 KCNMB4Q86W47 210 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HORMAD1Q86X24 394 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TOE1Q96GM8 510 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 C1QTNF2Q9BXJ5 285 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TPSD1Q9BZJ3 242 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PPANQ9NQ55 473 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PRMT8Q9NR22 394 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IARS2Q9NSE4 1012 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZSCAN32Q9NX65 697 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 KCTD5Q9NXV2 234 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CD84Q9UIB8 345 aa16.28■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SPTBN2O15020 2390 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IGHV1OR15-9A0A0B4J2B8 117 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CCDC163A0A0D9SF12 145 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GLYATL1P3A0A0U1RQE8 302 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FAM47DPA6NHR8 397 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CXorf49A8MYA2 514 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 AXIN1O15169 862 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CD3EAPO15446 510 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SRP72O76094 671 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SEMA4FO95754 770 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SHBGP04278 402 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TDGF1P13385 188 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 DPTQ07507 201 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 THOC5Q13769 683 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FGL2Q14314 439 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 STAT4Q14765 748 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CHRNA6Q15825 494 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZNF284Q2VY69 593 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 KBTBD12Q3ZCT8 623 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TMEM259Q4ZIN3 620 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZNF765Q7L2R6 523 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HDXQ7Z353 690 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TRIM69Q86WT6 500 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CNTN4Q8IWV2 1026 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FRMD1Q8N878 549 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GPR150Q8NGU9 434 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZNF398Q8TD17 642 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RLN3Q8WXF3 142 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ASB12Q8WXK4 309 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SCAMP4Q969E2 229 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CYTH2Q99418 400 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CCDC77Q9BR77 488 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RIOK2Q9BVS4 552 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SLC17A9Q9BYT1 436 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SMG5Q9UPR3 1016 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NFS1Q9Y697 457 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TRPM6Q9BX84 2022 aa16.27■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LRRK1Q38SD2 2015 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PAK4O96013 591 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FOXN2P32314 431 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CACNG1Q06432 222 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DMWDQ09019 674 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SGCGQ13326 291 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SMAD1Q15797 465 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FASTKD1Q53R41 847 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 HENMT1Q5T8I9 393 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ALS2CLQ60I27 953 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FAM151BQ6UXP7 276 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SNX20Q7Z614 316 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LMNTD2Q8IXW0 634 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TRAM1L1Q8N609 369 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CALML6Q8TD86 181 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CDKL2Q92772 493 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 AP2M1Q96CW1 435 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NUS1Q96E22 293 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 AGAP2Q99490 1192 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FAM96AQ9H5X1 160 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CATSPERZQ9NTU4 200 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 VPS18Q9P253 973 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PLAAQ9Y263 795 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms