RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CPSF2Q9P2I0 782 aaKnown RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 GGT7Q9UJ14 662 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZFP69BQ9UJL9 534 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 APPL1Q9UKG1 709 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 PLA2G4CQ9UP65 541 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZNF711Q9Y462 761 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 SPO11Q9Y5K1 396 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 COMMD10Q9Y6G5 202 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 F5P12259 2224 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 KIF26AQ9ULI4 1882 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 HGSO14964 777 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 SMAD6O43541 496 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 PIGNO95427 931 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 PRAMEF12O95522 483 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CD160O95971 181 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CCDC166P0CW27 439 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CYP2A6P11509 494 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 ITGALP20701 1170 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 GABRB3P28472 473 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 HLA-FP30511 346 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 SLC26A3P40879 764 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 VIPR2P41587 438 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ZNF140P52738 457 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 TAS2R39P59534 338 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ABCE1P61221 599 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 IRF9Q00978 393 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CACNG1Q06432 222 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ARHGEF7Q14155 803 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 GRM2Q14416 872 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 PTPRCAPQ14761 206 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ACAP2Q15057 778 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 DHCR24Q15392 516 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 FUT11Q495W5 492 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 IER5LQ5T953 404 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ZDHHC20Q5W0Z9 365 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CWF19L1Q69YN2 538 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 VITQ6UXI7 678 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ZYG11AQ6WRX3 759 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CERS6Q6ZMG9 384 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ZCCHC23Q6ZST2 131 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 TPRG1Q6ZUI0 275 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 LDB1Q86U70 411 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 SLC22A9Q8IVM8 553 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 DTWD2Q8NBA8 298 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 MDGA1Q8NFP4 955 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 UCMAQ8WVF2 138 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 NXNL1Q96CM4 212 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ZSWIM3Q96MP5 696 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 HEPHQ9BQS7 1158 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CPEB1Q9BZB8 566 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 PLA2G2FQ9BZM2 168 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ILKAPQ9H0C8 392 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 MRPL46Q9H2W6 279 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 C8orf33Q9H7E9 229 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 EML4Q9HC35 981 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 RAD18Q9NS91 495 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 TXLNGQ9NUQ3 528 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ZNF358Q9NW07 568 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 POLR3BQ9NW08 1133 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 KCNK4Q9NYG8 393 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 DEC1Q9P2X7 70 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 FKBPLQ9UIM3 349 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 CLEC4EQ9ULY5 219 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 ERVW-1Q9UQF0 538 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 APOBEC2Q9Y235 224 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 HS3ST2Q9Y278 367 aa9.26□□□□□ -0.93
SS18-220ENST00000582092 HELZP42694 1942 aaKnown RBP9.26□□□□□ -0.93
SS18-220ENST00000582092 A0A0J9YYE9 177 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 FAM170BA6NMN3 283 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CCDC22O60826 627 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 SNUPNO95149 360 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 TOP3BO95985 862 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 PRLP01236 227 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 TRBC1P01850 177 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 SRPRAP08240 638 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 SLC35E2BP0CK96 405 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 EZRP15311 586 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 ZNF7P17097 686 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 CHRM3P20309 590 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 FCARP24071 287 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 ATP5F1P24539 256 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 HMGCLP35914 325 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 SKIV2L2P42285 1042 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 PTGER3P43115 390 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CTSOP43234 321 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 STK19P49842 368 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 STC1P52823 247 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CORO7P57737 925 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 NHLH1Q02575 133 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 FCHO2Q0JRZ9 810 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CCDC15Q0P6D6 951 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 IHHQ14623 411 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PCLAFQ15004 111 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PDGFRLQ15198 375 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 E2F5Q15329 346 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms