RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SPINT3P49223 89 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 CSNK1EP49674 416 aaKnown RBP15.46■□□□□ 0.07
SS18-216ENST00000580751 CLDN2P57739 230 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 DCDC1P59894 354 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 DPTQ07507 201 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 CCDC6Q16204 474 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 CCDC38Q502W7 563 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 ZDHHC20Q5W0Z9 365 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 ZNF534Q76KX8 674 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 PTAR1Q7Z6K3 402 aaPredicted RBP15.46■□□□□ 0.07
SS18-216ENST00000580751 NLRP8Q86W28 1048 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 DCP2Q8IU60 420 aaKnown RBP15.46■□□□□ 0.07
SS18-216ENST00000580751 GSPT2Q8IYD1 628 aaKnown RBP15.46■□□□□ 0.07
SS18-216ENST00000580751 TTC30BQ8N4P2 665 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 OR52K1Q8NGK4 314 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 AP2M1Q96CW1 435 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 EID2BQ96D98 161 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 KLHDC7BQ96G42 594 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 ZDHHC5Q9C0B5 715 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 IL22Q9GZX6 179 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 MBNL1Q9NR56 388 aaKnown RBP15.46■□□□□ 0.07
SS18-216ENST00000580751 SEMA4GQ9NTN9 838 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 PKP3Q9Y446 797 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 KNL1Q8NG31 2342 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 RALGAPA1Q6GYQ0 2036 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 A0A1B0GVT2 93 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 POM121BA6NF01 834 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 GOLGA8CPA6NN73 597 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 H0Y8X5 98 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 TLR4O00206 839 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 AURKAO14965 403 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 GFRA3O60609 400 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 TTC4O95801 387 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 ABHD2P08910 425 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 THEGLP0DJG4 465 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 LPOP22079 712 aaPredicted RBP15.45■□□□□ 0.06
SS18-216ENST00000580751 TEAD1P28347 426 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 PFN3P60673 137 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 YPEL5P62699 121 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 PDIA2Q13087 525 aaKnown RBP15.45■□□□□ 0.06
SS18-216ENST00000580751 MSLNQ13421 630 aaPredicted RBP15.45■□□□□ 0.06
SS18-216ENST00000580751 KCTD19Q17RG1 926 aaPredicted RBP15.45■□□□□ 0.06
SS18-216ENST00000580751 ALS2CLQ60I27 953 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 IL27RAQ6UWB1 636 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 CYS1Q717R9 158 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 PYROXD1Q8WU10 500 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 BMFQ96LC9 184 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 PLEKHG4BQ96PX9 1271 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 C19orf43Q9BQ61 176 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 ABCG8Q9H221 673 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 SMOC1Q9H4F8 434 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 FAM83DQ9H4H8 585 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 WDR26Q9H7D7 661 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 SAYSD1Q9NPB0 183 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 PIH1D1Q9NWS0 290 aaKnown RBP15.45■□□□□ 0.06
SS18-216ENST00000580751 CD84Q9UIB8 345 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 ANKRD6Q9Y2G4 727 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 TEX264Q9Y6I9 313 aa15.45■□□□□ 0.06
SS18-216ENST00000580751 PTPRZ1P23471 2315 aaPredicted RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 HEATR9A2RTY3 570 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 GOLGA8MH3BSY2 632 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 ARHGAP33O14559 1287 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 STX7O15400 261 aaKnown RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 WNT1P04628 370 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 TPH1P17752 444 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 GRIA1P42261 906 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 THOP1P52888 689 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 EIF3BP55884 814 aaKnown RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 NXPH1P58417 271 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 GRIK2Q13002 908 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 SEPT6Q14141 434 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 FRG1Q14331 258 aaKnown RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 INPP5AQ14642 412 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 CASP8Q14790 479 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 POU6F1Q14863 301 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 FNBP1LQ5T0N5 605 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 RAET1GQ6H3X3 334 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 PNCKQ6P2M8 343 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 ZNF449Q6P9G9 518 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 LAYNQ6UX15 382 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 Q6ZSR6 202 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 RFLNAQ6ZTI6 216 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 CROCCP2Q86T23 111 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 CCDC25Q86WR0 208 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 DCLK2Q8N568 766 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 OR13H1Q8NG92 308 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 PEX13Q92968 403 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 SCAMP4Q969E2 229 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 FAM122AQ96E09 287 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 SIGLEC10Q96LC7 697 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 RANBP9Q96S59 729 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 EBNA1BP2Q99848 306 aaKnown RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 ZSCAN5AQ9BUG6 496 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 RIOK2Q9BVS4 552 aaKnown RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 FUT8Q9BYC5 575 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 ACBD3Q9H3P7 528 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 PPCSQ9HAB8 311 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 MRM3Q9HC36 420 aaKnown RBP15.44■□□□□ 0.06
SS18-216ENST00000580751 PARD6AQ9NPB6 346 aa15.44■□□□□ 0.06
SS18-216ENST00000580751 GPR27Q9NS67 375 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms