RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TRBV23OR9-2A0A075B6M9 112 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 LRRC53A6NM62 1247 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 PEX11BO96011 259 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 LIFP15018 202 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 CTPS1P17812 591 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 WT1P19544 449 aaPredicted RBP17.79■□□□□ 0.44
MKS1-209ENST00000580127 LHCGRP22888 699 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 MPSTP25325 297 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 POLE2P56282 527 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 MAXP61244 160 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 KRT81Q14533 505 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 CLCA4Q14CN2 919 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 LRRC66Q68CR7 880 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 TIGD7Q6NT04 549 aaPredicted RBP17.79■□□□□ 0.44
MKS1-209ENST00000580127 CYP4V2Q6ZWL3 525 aaPredicted RBP17.79■□□□□ 0.44
MKS1-209ENST00000580127 MARK2Q7KZI7 788 aaKnown RBP17.79■□□□□ 0.44
MKS1-209ENST00000580127 KDELC2Q7Z4H8 507 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 SLC9B2Q86UD5 537 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 TP53INP2Q8IXH6 220 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 NLGN4XQ8N0W4 816 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 NLGN4YQ8NFZ3 816 aaPredicted RBP17.79■□□□□ 0.44
MKS1-209ENST00000580127 PIH1D2Q8WWB5 315 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 HTR3CQ8WXA8 447 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 NSMCE3Q96MG7 304 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 EPB41L1Q9H4G0 881 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 FBXO8Q9NRD0 319 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 PDP2Q9P2J9 529 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 CD84Q9UIB8 345 aa17.79■□□□□ 0.44
MKS1-209ENST00000580127 OR5K4A6NMS3 321 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 SMTNL1A8MU46 457 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 RAD1O60671 282 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 PRKCIP41743 596 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 RPL26P61254 145 aaKnown RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 MC2RQ01718 297 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 PTSQ03393 145 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 TLE1Q04724 770 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 HADHQ16836 314 aaKnown RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 SMTNL2Q2TAL5 461 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 SNAP47Q5SQN1 464 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 ZNF571Q7Z3V5 609 aaPredicted RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 TSPAN33Q86UF1 283 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 SFRP1Q8N474 314 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 NCSTNQ92542 709 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 SLC45A3Q96JT2 553 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 TRIM7Q9C029 511 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 OCIAD1Q9NX40 245 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 VPS18Q9P253 973 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 RCOR3Q9P2K3 495 aaPredicted RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 IP6K2Q9UHH9 426 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 ANAPC2Q9UJX6 822 aa17.78■□□□□ 0.44
MKS1-209ENST00000580127 RPL26L1Q9UNX3 145 aaKnown RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 BZW2Q9Y6E2 419 aaKnown RBP17.78■□□□□ 0.44
MKS1-209ENST00000580127 ZFC3H1O60293 1989 aaKnown RBP17.77■□□□□ 0.44
MKS1-209ENST00000580127 A0A0J9YYE9 177 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 A8MU76 341 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 TRBC1P01850 177 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 RARAP10276 462 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 ZNF165P49910 485 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 HHEXQ03014 270 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 SEPT6Q14141 434 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 ANKS6Q68DC2 871 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 APTXQ7Z2E3 356 aaKnown RBP17.77■□□□□ 0.44
MKS1-209ENST00000580127 TEX26Q8N6G2 289 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 CCHCR1Q8TD31 782 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 SCAMP4Q969E2 229 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 HERPUD2Q9BSE4 406 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 RIOK2Q9BVS4 552 aaKnown RBP17.77■□□□□ 0.44
MKS1-209ENST00000580127 ISCUQ9H1K1 167 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 SARS2Q9NP81 518 aaKnown RBP17.77■□□□□ 0.44
MKS1-209ENST00000580127 ETNK2Q9NVF9 386 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 PILRAQ9UKJ1 303 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 PLEKHM1Q9Y4G2 1056 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 ST14Q9Y5Y6 855 aa17.77■□□□□ 0.44
MKS1-209ENST00000580127 IL1R2P27930 398 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 SSR1P43307 286 aaKnown RBP17.76■□□□□ 0.43
MKS1-209ENST00000580127 EPHA4P54764 986 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 CHST15Q7LFX5 561 aaPredicted RBP17.76■□□□□ 0.43
MKS1-209ENST00000580127 LYSMD3Q7Z3D4 306 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 PTRH1Q86Y79 214 aaKnown RBP17.76■□□□□ 0.43
MKS1-209ENST00000580127 PLXDC1Q8IUK5 500 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 AOPEPQ8N6M6 819 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 SLC37A2Q8TED4 501 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 PTCD2Q8WV60 388 aaKnown RBP17.76■□□□□ 0.43
MKS1-209ENST00000580127 PCDHB3Q9Y5E6 796 aa17.76■□□□□ 0.43
MKS1-209ENST00000580127 BOD1L1Q8NFC6 3051 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 KIR2DS5A0A0G2JLQ3 304 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 A0A0G2JNG1 304 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 RGSL1A5PLK6 1076 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 KIR2DS3K7RE56 304 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 MYO1FO00160 1098 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 DDX3XO00571 662 aaKnown RBP eCLIP17.75■□□□□ 0.436e-6■□□□□ 8.9
MKS1-209ENST00000580127 POLR1CO15160 346 aaPredicted RBP17.75■□□□□ 0.43
MKS1-209ENST00000580127 MATN3O15232 486 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 INPP4BO15327 924 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 MAP3K6O95382 1288 aa17.75■□□□□ 0.43
MKS1-209ENST00000580127 PDHA1P08559 390 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms