RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 BOLA1Q9Y3E2 137 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PCDHGA7Q9Y5G6 932 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 OAS3Q9Y6K5 1087 aaKnown RBP3.83□□□□□ -1.8
NUP85-209ENST00000578987 AHCTF1Q8WYP5 2266 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 PIEZO2Q9H5I5 2752 aa3.83□□□□□ -1.8
NUP85-209ENST00000578987 HELZ2Q9BYK8 2649 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 PCM1Q15154 2024 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 IGHV1OR21-1A0A087WYE8 117 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 A0A1B0GTH6 734 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 A0A1W2PQC6 194 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 H3BRJ5 948 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 K7EM74 188 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 PDE2AO00408 941 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 TERTO14746 1132 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 HTRA2O43464 458 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 DUX1O43812 170 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 HEXIM1O94992 359 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 PGLSO95336 258 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CLDN7O95471 211 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 PEX11BO96011 259 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SOD1P00441 154 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SERPINC1P01008 464 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CD48P09326 243 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 RARAP10276 462 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CYP2A6P11509 494 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 MYCLP1P12525 358 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 CR2P20023 1033 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 NR1D1P20393 614 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CSF2RBP32927 897 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CSTF2P33240 577 aaKnown RBP eCLIP3.82□□□□□ -1.8
NUP85-209ENST00000578987 ARL4AP40617 200 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ACTR1BP42025 376 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SSR1P43307 286 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 HCAR3P49019 387 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CSRP3P50461 194 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 RENBPP51606 427 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 UBASH3AP57075 661 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ACTR1AP61163 376 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 FANCCQ00597 558 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 DSC2Q02487 901 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 TLE1Q04724 770 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ILF3Q12906 894 aaKnown RBP eCLIP3.82□□□□□ -1.8
NUP85-209ENST00000578987 SLC10A2Q12908 348 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 EIF3IQ13347 325 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 DPYSQ14117 519 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ZNF235Q14590 738 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 RFTN1Q14699 578 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 ASIC2Q16515 512 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 PYCR3Q53H96 274 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ARMC12Q5T9G4 340 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 MARC1Q5VT66 337 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 HIST2H2BCQ6DN03 193 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 C16orf46Q6P387 395 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 TMEM71Q6P5X7 295 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 TMCO3Q6UWJ1 677 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CHST15Q7LFX5 561 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 TIPARPQ7Z3E1 657 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 KDELC2Q7Z4H8 507 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 POLNQ7Z5Q5 900 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 GAS2L3Q86XJ1 694 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ANKMY2Q8IV38 441 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CACNA2D3Q8IZS8 1091 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 IL22RA1Q8N6P7 574 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 KIAA1524Q8TCG1 905 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SLC37A2Q8TED4 501 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CPLX3Q8WVH0 158 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 ZNF653Q96CK0 615 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 AP2M1Q96CW1 435 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 IQCDQ96DY2 449 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 DTD2Q96FN9 168 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SCRN2Q96FV2 425 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 AHCYL2Q96HN2 611 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 ELMO2Q96JJ3 720 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 NAP1L5Q96NT1 182 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 CSPG4P5Q96PW8 444 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 PSKH2Q96QS6 385 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 NUDCD1Q96RS6 583 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 WDR24Q96S15 920 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SEMA3CQ99985 751 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SYT11Q9BT88 431 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 RIOK2Q9BVS4 552 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 TBC1D10AQ9BXI6 508 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 GSDMCQ9BYG8 508 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SLC25A18Q9H1K4 315 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 PCDH18Q9HCL0 1135 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 STARD5Q9NSY2 213 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 DTLQ9NZJ0 730 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 AKAP7Q9P0M2 348 aaPredicted RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 ACSL6Q9UKU0 697 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 CNOT6Q9ULM6 557 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 KCNK6Q9Y257 313 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SLC17A4Q9Y2C5 497 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 TTLL3Q9Y4R7 772 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 MRPS18BQ9Y676 258 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 TENM4Q6N022 2769 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 MYO18BQ8IUG5 2567 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 BSNQ9UPA5 3926 aa3.82□□□□□ -1.8
NUP85-209ENST00000578987 SNRNP200O75643 2136 aaKnown RBP3.82□□□□□ -1.8
NUP85-209ENST00000578987 ANKRD12Q6UB98 2062 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms