RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 FAM169AQ9Y6X4 670 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 ARID1BQ8NFD5 2236 aaPredicted RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 A0A1W2PPC4 97 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 J3KR12 359 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 MID1O15344 667 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 KDELR3O43731 214 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 RNASEH1O60930 286 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 WNT1P04628 370 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 HLA-DQB2P05538 268 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 IGHV4-34P06331 123 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 DLDP09622 509 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 PAMP19021 973 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 CA4P22748 312 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 MDH1P40925 334 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 SERPINB9P50453 376 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 SGSHP51688 502 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 ST8SIA6P61647 398 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 RPS24P62847 133 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 CFHR1Q03591 330 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 ZBTB16Q05516 673 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 LAMB3Q13751 1172 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 SEPT7Q16181 437 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 UBAP2Q5T6F2 1119 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 RNF219Q5W0B1 726 aaPredicted RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 ZNF449Q6P9G9 518 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 UNC5AQ6ZN44 842 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 CYS1Q717R9 158 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 ZNF534Q76KX8 674 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 ADIPOR2Q86V24 386 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 IGDCC3Q8IVU1 814 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 SRRM1Q8IYB3 904 aaKnown RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 AHI1Q8N157 1196 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 PPM1NQ8N819 430 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 DYDC1Q8WWB3 177 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 FGF11Q92914 225 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 TTC17Q96AE7 1141 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 ORAI3Q9BRQ5 295 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 MLPHQ9BV36 600 aaPredicted RBP10.19□□□□□ -0.78
SS18-210ENST00000578700 EBF2Q9HAK2 575 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 UBP1Q9NZI7 540 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 TBC1D30Q9Y2I9 924 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 RPS6KL1Q9Y6S9 549 aa10.19□□□□□ -0.78
SS18-210ENST00000578700 PYCARD-AS1I3L0S3 204 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 WNT9AO14904 365 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 BRINP1O60477 761 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 SIN3BO75182 1162 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 USP12O75317 370 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 PMPCBO75439 489 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 RNASEH2AO75792 299 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 LUC7L3O95232 432 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 MT-ND3P03897 115 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 C1SP09871 688 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 BRAFP15056 766 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 GLDCP23378 1020 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 CNTFP26441 200 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 CD38P28907 300 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 CD70P32970 193 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 ACVRL1P37023 503 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 GRIA1P42261 906 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 ACADVLP49748 655 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 GNGT1P63211 74 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 SLC10A7Q0GE19 358 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 SHBQ15464 509 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 KBTBD12Q3ZCT8 623 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 PCID2Q5JVF3 399 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 MPP7Q5T2T1 576 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 STEAP4Q687X5 459 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 KCTD11Q693B1 232 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 FBXL19Q6PCT2 694 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 ADGRD1Q6QNK2 874 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 MMAAQ8IVH4 418 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 MFN1Q8IWA4 741 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 FAM217AQ8IXS0 508 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 TEX26Q8N6G2 289 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
SS18-210ENST00000578700 OR14C36Q8NHC7 312 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 WFDC5Q8TCV5 224 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 SAP25Q8TEE9 199 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 ALKBH8Q96BT7 664 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 MTBPQ96DY7 904 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 IMP4Q96G21 291 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 OXNAD1Q96HP4 312 aaPredicted RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 SERAC1Q96JX3 654 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 FICDQ9BVA6 458 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 C2orf49Q9BVC5 232 aaPredicted RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 NRSN2Q9GZP1 204 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 TRABDQ9H4I3 376 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 FBRSQ9HAH7 460 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 INTS9Q9NV88 658 aaKnown RBP10.18□□□□□ -0.78
SS18-210ENST00000578700 SYBUQ9NX95 663 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 NSMCE4AQ9NXX6 385 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 ZFATQ9P243 1243 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 ZNF212Q9UDV6 495 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 SERGEFQ9UGK8 458 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 ZNF180Q9UJW8 692 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 VPS28Q9UK41 221 aa10.18□□□□□ -0.78
SS18-210ENST00000578700 PIEZO2Q9H5I5 2752 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms