RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CASC4Q6P4E1 433 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 IL27RAQ6UWB1 636 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 FAM151BQ6UXP7 276 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 ADAMTSL4Q6UY14 1074 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 KDM7AQ6ZMT4 941 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 HEATR4Q86WZ0 1026 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 PELI3Q8N2H9 469 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 DCLK2Q8N568 766 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 DTX3LQ8TDB6 740 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 PEX13Q92968 403 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 TCEAL3Q969E4 200 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 AGAP2Q99490 1192 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 TEX101Q9BY14 249 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 IL26Q9NPH9 171 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 FSCN3Q9NQT6 498 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 GDF3Q9NR23 364 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 GPR27Q9NS67 375 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 NLE1Q9NVX2 485 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-217ENST00000575711 SAMD15Q9P1V8 674 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 FKBPLQ9UIM3 349 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 RIMKLBQ9ULI2 386 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 VPS13AQ96RL7 3174 aa13.91□□□□□ -0.18
RPAIN-217ENST00000575711 MYO15AQ9UKN7 3530 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 CCDC78A2IDD5 438 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 FADS2P1A8MWK0 482 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 ARHGAP33O14559 1287 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 FOXD2O60548 495 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 GFRA3O60609 400 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 PRAMEF1O95521 474 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 HOXC4P09017 264 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 MYCLP1P12525 358 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 KELP23276 732 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 MAGEA3P43357 314 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 KIAA1024LP59773 190 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 ITGA9Q13797 1035 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 SF3A2Q15428 464 aaKnown RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 MACC1Q6ZN28 852 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 PDIK1LQ8N165 341 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 SLC22A18ASQ8N1D0 253 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 GPR161Q8N6U8 529 aaKnown RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 FUBP1Q96AE4 644 aaKnown RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 HIC2Q96JB3 615 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 KIFC1Q9BW19 673 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 MRM3Q9HC36 420 aaKnown RBP13.9□□□□□ -0.18
RPAIN-217ENST00000575711 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 SOX13Q9UN79 622 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 SNX11Q9Y5W9 270 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 LRRK1Q38SD2 2015 aa13.9□□□□□ -0.18
RPAIN-217ENST00000575711 SPTY2D1-AS1A0A0U1RR47 76 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 MAGEB16A2A368 324 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 H7C0S8 307 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 CCL22O00626 93 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 INPP4BO15327 924 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 SRP72O76094 671 aaKnown RBP13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ENGP17813 658 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ITGALP20701 1170 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 PSMA3P25788 255 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 MC4RP32245 332 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 CTSKP43235 329 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 DRG2P55039 364 aaKnown RBP13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ARL4CP56559 192 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 PRAMEP78395 509 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 BNC1Q01954 994 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 GUCY2DQ02846 1103 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 CAV1Q03135 178 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 CHRNA6Q15825 494 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 HIF1AQ16665 826 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ENPP7Q6UWV6 458 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 PRR23CQ6ZRP0 262 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 PARGQ86W56 976 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
RPAIN-217ENST00000575711 MPP5Q8N3R9 675 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 OXR1Q8N573 874 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 OR13J1Q8NGT2 312 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF398Q8TD17 642 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 CDKN2AIPNLQ96HQ2 116 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ZNF778Q96MU6 729 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 WDR92Q96MX6 357 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 VPS35Q96QK1 796 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 GTPBP2Q9BX10 602 aaKnown RBP13.89□□□□□ -0.19
RPAIN-217ENST00000575711 ERVMER34-1Q9H9K5 563 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 PARD6AQ9NPB6 346 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 GRHL1Q9NZI5 618 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 SLC2A6Q9UGQ3 507 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 MAD1L1Q9Y6D9 718 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 SLC30A1Q9Y6M5 507 aa13.89□□□□□ -0.19
RPAIN-217ENST00000575711 SDK1Q7Z5N4 2213 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 DMDP11532 3685 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 ESYT3A0FGR9 886 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 LNP1A1A4G5 178 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 HAX1O00165 279 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 GAPDHSO14556 408 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-217ENST00000575711 TP73O15350 636 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 SLC25A14O95258 325 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-217ENST00000575711 CER1O95813 267 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 PLTPP55058 493 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 XIAPP98170 497 aa13.88□□□□□ -0.19
RPAIN-217ENST00000575711 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
RPAIN-217ENST00000575711 NFATC2Q13469 925 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms