RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 NAP1L3Q99457 506 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 AGAP2Q99490 1192 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 TEX101Q9BY14 249 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 GPR63Q9BZJ6 419 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CLPBQ9H078 707 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CYP4F12Q9HCS2 524 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CDC23Q9UJX2 597 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 R3HDM2Q9Y2K5 976 aaKnown RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 PRSS38A1L453 326 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 INPP4BO15327 924 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 DKK1O94907 266 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 SOD1P00441 154 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 PSMB4P28070 264 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ELOCQ15369 112 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 LONRF2Q1L5Z9 754 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 SIRPB2Q5JXA9 342 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ADAMTSL4Q6UY14 1074 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ZNF765Q7L2R6 523 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 TBATAQ96M53 351 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 SPATA13Q96N96 652 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 FICDQ9BVA6 458 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CARS2Q9HA77 564 aaKnown RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 MAGEE1Q9HCI5 957 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 SIRPGQ9P1W8 387 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 PCDHGA1Q9Y5H4 931 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 SPO11Q9Y5K1 396 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 DGKBQ9Y6T7 804 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 LMO7DNF2Z398 122 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 TPP1O14773 563 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 AURKAO14965 403 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 ZNF185O15231 689 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 FANCGO15287 622 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 YY2O15391 372 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 ANXA9O76027 345 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 PYGLP06737 847 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 ACP1P24666 158 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 TEAD1P28347 426 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 GNPDA1P46926 289 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 POLD2P49005 469 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 GEMP55040 296 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 CLDN6P56747 220 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 PRPSAP1Q14558 356 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 ARHGEF18Q6ZSZ5 1173 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 GKN2Q86XP6 184 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 SLC13A5Q86YT5 568 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-216ENST00000575599 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 MNS1Q8NEH6 495 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 MAIP1Q8WWC4 291 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 EID2BQ96D98 161 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 HIC2Q96JB3 615 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 APOL2Q9BQE5 337 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 FRMD8Q9BZ67 464 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-216ENST00000575599 TMEM168Q9H0V1 697 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 FAM83DQ9H4H8 585 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
RPAIN-216ENST00000575599 LY6G6EA0A0G2JKS1 128 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 FADS2P1A8MWK0 482 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 ZNF189O75820 626 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 AGTP01019 485 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 CEACAM5P06731 702 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 CKMT1AP12532 417 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 HLA-DPA1P20036 260 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 GDF10P55107 478 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 OLIG2Q13516 323 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 NR0B2Q15466 257 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 SLC1A5Q15758 541 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 HENMT1Q5T8I9 393 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 MARK2Q7KZI7 788 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 GLT6D1Q7Z4J2 308 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 TMC3Q7Z5M5 1100 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 TAF8Q7Z7C8 310 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 RAVER1Q8IY67 606 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 CEP112Q8N8E3 955 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 FAM181AQ8N9Y4 354 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 SCG3Q8WXD2 468 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 CNTNAP3BQ96NU0 1288 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 SRPK1Q96SB4 655 aaKnown RBP13.18□□□□□ -0.3
RPAIN-216ENST00000575599 SPATA16Q9BXB7 569 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 CNTNAP3Q9BZ76 1288 aa13.18□□□□□ -0.3
RPAIN-216ENST00000575599 BPIFA1Q9NP55 256 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms