RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CCNJLQ8IV13 435 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 MOSPD1Q9UJG1 213 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 REXO2Q9Y3B8 237 aaKnown RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 PCDHA13Q9Y5I0 950 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 OAS3Q9Y6K5 1087 aaKnown RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 ZNF462Q96JM2 2506 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 SCN8AQ9UQD0 1980 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 A0A0A6YYK5 440 aaPredicted RBP17.32■□□□□ 0.36
SMG6-214ENST00000573827 B4GAT1O43505 415 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 SPOPO43791 374 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 DNAJC6O75061 913 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 CA4P22748 312 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 PTPN3P26045 913 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 CCKBRP32239 447 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 TEX44Q53QW1 395 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 DOK6Q6PKX4 331 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 CLEC14AQ86T13 490 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 SLITRK4Q8IW52 837 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 CCDC170Q8IYT3 715 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 KATNAL2Q8IYT4 538 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 NAGSQ8N159 534 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 WDR36Q8NI36 951 aaKnown RBP17.32■□□□□ 0.36
SMG6-214ENST00000573827 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.32■□□□□ 0.36
SMG6-214ENST00000573827 PATE1Q8WXA2 126 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 KRT35Q92764 455 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 MRFAP1L1Q96HT8 127 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 TEKT5Q96M29 485 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 AGAP3Q96P47 875 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 GFM1Q96RP9 751 aaKnown RBP17.32■□□□□ 0.36
SMG6-214ENST00000573827 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
SMG6-214ENST00000573827 GSDMCQ9BYG8 508 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 FOXP3Q9BZS1 431 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 DPEP2Q9H4A9 486 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 HAUS2Q9NVX0 235 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 LRIT1Q9P2V4 623 aa17.32■□□□□ 0.36
SMG6-214ENST00000573827 TLN1Q9Y490 2541 aaKnown RBP17.32■□□□□ 0.36
SMG6-214ENST00000573827 ZFC3H1O60293 1989 aaKnown RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 hCG_1818297A0A087WSY0 165 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 CCDC187A0A096LP49 1063 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 C1orf232A0A0U1RR37 186 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 RGSL1A5PLK6 1076 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 GOLGA6CA6NDK9 693 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 GOLGA6BA6NDN3 693 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 PPP1R12AO14974 1030 aaPredicted RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 CST8O60676 142 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 PYGLP06737 847 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 GOLGA6DP0CG33 693 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 TNNT1P13805 278 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 NR2C2P49116 596 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 PCBP4P57723 403 aaKnown RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 ILF3Q12906 894 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMG6-214ENST00000573827 GALNT3Q14435 633 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 LLGL1Q15334 1064 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 C11orf63Q6NUN7 778 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 LYSMD3Q7Z3D4 306 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 NT5DC3Q86UY8 548 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 GAS2L3Q86XJ1 694 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 ARL14Q8N4G2 192 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 ZNF248Q8NDW4 579 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 EXD1Q8NHP7 514 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 SPATA22Q8NHS9 363 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 ZDHHC1Q8WTX9 485 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 OR2M4Q96R27 311 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 PANX2Q96RD6 677 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 HERPUD2Q9BSE4 406 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 MAK16Q9BXY0 300 aaKnown RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 SUDS3Q9H7L9 328 aaPredicted RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 GLOD4Q9HC38 313 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 GOLGA6AQ9NYA3 693 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 NFKBIL1Q9UBC1 381 aaPredicted RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 ATXN7L1Q9ULK2 861 aaPredicted RBP17.31■□□□□ 0.36
SMG6-214ENST00000573827 BOD1L1Q8NFC6 3051 aa17.31■□□□□ 0.36
SMG6-214ENST00000573827 INPP4BO15327 924 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 RRP8O43159 456 aaKnown RBP17.3■□□□□ 0.36
SMG6-214ENST00000573827 ECEL1O95672 775 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 EML2O95834 649 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 MT-CYBP00156 380 aaPredicted RBP17.3■□□□□ 0.36
SMG6-214ENST00000573827 MLLT3P42568 568 aaPredicted RBP17.3■□□□□ 0.36
SMG6-214ENST00000573827 SLC30A9Q6PML9 568 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 TMC3Q7Z5M5 1100 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 Q8N9G6 341 aaPredicted RBP17.3■□□□□ 0.36
SMG6-214ENST00000573827 KIAA1524Q8TCG1 905 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 FAM83DQ9H4H8 585 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 THSD1Q9NS62 852 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 VPS18Q9P253 973 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 SPO11Q9Y5K1 396 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 ADGRG1Q9Y653 693 aa17.3■□□□□ 0.36
SMG6-214ENST00000573827 A6NCN8 305 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 SOWAHDA6NJG2 315 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 PPM1DO15297 605 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 ITGA2BP08514 1039 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 PIRTP0C851 137 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 INHBCP55103 352 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 CDK18Q07002 472 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 TFDP2Q14188 446 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 TFDP3Q5H9I0 405 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 KDELC1Q6UW63 502 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 ZNF574Q6ZN55 896 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms