RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SLC4A1P02730 911 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 ZSCAN5DPP0CG00 497 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 JUNDP17535 347 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 KELP23276 732 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 TEAD1P28347 426 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 GPR1P46091 355 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 DCDC1P59894 354 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 CDK16Q00536 496 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 CDH17Q12864 832 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 SPARCL1Q14515 664 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PPP1R7Q15435 360 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 RAET1GQ6H3X3 334 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PNCKQ6P2M8 343 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PPP1R21Q6ZMI0 780 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 RAB44Q7Z6P3 723 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PRUNE1Q86TP1 453 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 ZNF548Q8NEK5 533 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-213ENST00000573577 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
RPAIN-213ENST00000573577 APOL2Q9BQE5 337 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 APOOQ9BUR5 198 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 DDX47Q9H0S4 455 aaKnown RBP13.48□□□□□ -0.25
RPAIN-213ENST00000573577 ABCG8Q9H221 673 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 FAM83DQ9H4H8 585 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 WDR26Q9H7D7 661 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 PHPT1Q9NRX4 125 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-213ENST00000573577 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPAIN-213ENST00000573577 KLF15Q9UIH9 416 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 OR1A2Q9Y585 309 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 SPO11Q9Y5K1 396 aa13.48□□□□□ -0.25
RPAIN-213ENST00000573577 A0A0U1RQS6 177 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 TRIM38O00635 465 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 FFAR2O15552 330 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 HYAL3O43820 417 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 DKK1O94907 266 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 HOXC4P09017 264 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 TRIM23P36406 574 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 SARNPP82979 210 aaKnown RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 GPS1Q13098 491 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 OLIG2Q13516 323 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 LAMB3Q13751 1172 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 NFATC4Q14934 902 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 TRIP13Q15645 432 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 SYDE1Q6ZW31 735 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 PHACTR4Q8IZ21 702 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 OR4C6Q8NH72 309 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 BTN2A2Q8WVV5 523 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 ADAMTS14Q8WXS8 1223 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 ZNF592Q92610 1267 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 SLCO2A1Q92959 643 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 SCNM1Q9BWG6 230 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 NFKBIL1Q9UBC1 381 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 APOBEC3BQ9UH17 382 aaKnown RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-213ENST00000573577 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 SPEGQ15772 3267 aa13.47□□□□□ -0.25
RPAIN-213ENST00000573577 NEMP2A6NFY4 417 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 SCAMP1O15126 338 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 AQP9O43315 295 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 SIGLEC6O43699 453 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 GIMD1P0DJR0 217 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 ALPPL2P10696 532 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 SPINK2P20155 84 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TPSB2P20231 275 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 VPS41P49754 854 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 BLKP51451 505 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 KIAA1024LP59773 190 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 PPARDQ03181 441 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 CKAP4Q07065 602 aaKnown RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TPSAB1Q15661 275 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 HENMT1Q5T8I9 393 aaKnown RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 PDPK2PQ6A1A2 396 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 DENND5AQ6IQ26 1287 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 RBFAQ8N0V3 343 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TTC30BQ8N4P2 665 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 SCAMP4Q969E2 229 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 EID2BQ96D98 161 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TBATAQ96M53 351 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 WDR92Q96MX6 357 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 PLEKHG4BQ96PX9 1271 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 C19orf43Q9BQ61 176 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 ZSCAN5AQ9BUG6 496 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 RIOK2Q9BVS4 552 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms