RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 RIOK2Q9BVS4 552 aaKnown RBP17.24■□□□□ 0.35
LITAF-211ENST00000572255 PISDQ9UG56 409 aa17.24■□□□□ 0.35
LITAF-211ENST00000572255 PLEKHM1Q9Y4G2 1056 aa17.24■□□□□ 0.35
LITAF-211ENST00000572255 HEY1Q9Y5J3 304 aa17.24■□□□□ 0.35
LITAF-211ENST00000572255 AHCTF1Q8WYP5 2266 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 C3orf70A6NLC5 250 aaPredicted RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 MTA2O94776 668 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 ALDH4A1P30038 563 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 ACTR1BP42025 376 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 ARHGAP25P42331 645 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 ACTR1AP61163 376 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 IFI35P80217 286 aaPredicted RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 ZBTB17Q13105 803 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 PEX6Q13608 980 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 NR1D2Q14995 579 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 QPCTQ16769 361 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 AMZ1Q400G9 498 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 PHF19Q5T6S3 580 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 SLC9A4Q6AI14 798 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 PCSK4Q6UW60 755 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 RAVER1Q8IY67 606 aaKnown RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 NAGSQ8N159 534 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 CNTD1Q8N815 330 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 SNRNP27Q8WVK2 155 aaKnown RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 TMEM159Q96B96 161 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 COX14Q96I36 57 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 CCDC42Q96M95 316 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 LYSMD1Q96S90 227 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 SEMA6CQ9H3T2 930 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 NHEJ1Q9H9Q4 299 aaPredicted RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 RDH14Q9HBH5 336 aa17.23■□□□□ 0.35
LITAF-211ENST00000572255 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
LITAF-211ENST00000572255 HELZ2Q9BYK8 2649 aaKnown RBP17.22■□□□□ 0.35
LITAF-211ENST00000572255 C1orf232A0A0U1RR37 186 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 ERVH48-1M5A8F1 160 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 AGRPO00253 132 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 INPP4BO15327 924 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 C1QL1O75973 258 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 CPNE6O95741 557 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 ITIH1P19827 911 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 RHDQ02161 417 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 BIRC2Q13490 618 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 PYCR3Q53H96 274 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 PIM3Q86V86 326 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 VSIG1Q86XK7 387 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 GALNT13Q8IUC8 556 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 RHOT2Q8IXI1 618 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 WDR24Q96S15 920 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 MLPHQ9BV36 600 aaPredicted RBP17.22■□□□□ 0.35
LITAF-211ENST00000572255 ACSL6Q9UKU0 697 aa17.22■□□□□ 0.35
LITAF-211ENST00000572255 ANKRD66B4E2M5 251 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 APOL1O14791 398 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 NVLO15381 856 aaKnown RBP17.21■□□□□ 0.35
LITAF-211ENST00000572255 ZW10O43264 779 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 ASMTLO95671 621 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 KRT1P04264 644 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 ETV5P41161 510 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 GPR3P46089 330 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 SPINT3P49223 89 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 AP1B1Q10567 949 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 CLPPQ16740 277 aaPredicted RBP17.21■□□□□ 0.35
LITAF-211ENST00000572255 LRRC38Q5VT99 294 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 NPNTQ6UXI9 565 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 USP53Q70EK8 1073 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 RNF214Q8ND24 703 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 CMKLR1Q99788 373 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 NUDT22Q9BRQ3 303 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 MAK16Q9BXY0 300 aaKnown RBP17.21■□□□□ 0.35
LITAF-211ENST00000572255 ADGRE3Q9BY15 652 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 CEP41Q9BYV8 373 aa17.21■□□□□ 0.35
LITAF-211ENST00000572255 OAS3Q9Y6K5 1087 aaKnown RBP17.21■□□□□ 0.35
LITAF-211ENST00000572255 K7ENP7 123 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 PPM1DO15297 605 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 ATP1A1P05023 1023 aaKnown RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 ZFXP17010 805 aaPredicted RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 CD1CP29017 333 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 LRP8Q14114 963 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 GALNT3Q14435 633 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 C16orf72Q14CZ0 275 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 PDK1Q15118 436 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 FAM182AQ5T1J6 154 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 HENMT1Q5T8I9 393 aaKnown RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 INO80CQ6PI98 192 aaPredicted RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 ZNF574Q6ZN55 896 aaPredicted RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 CCDC81Q6ZN84 652 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 RFX6Q8HWS3 928 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 CCHCR1Q8TD31 782 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 OLFM3Q96PB7 478 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 CCNL2Q96S94 520 aaPredicted RBP17.2■□□□□ 0.34
LITAF-211ENST00000572255 FAM83DQ9H4H8 585 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 WDR70Q9NW82 654 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 PKD2L2Q9NZM6 624 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 SEPT10Q9P0V9 454 aa17.2■□□□□ 0.34
LITAF-211ENST00000572255 VPS18Q9P253 973 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms