RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NFKBIAP25963 317 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 PPP6R3Q5H9R7 873 aaPredicted RBP19.72■□□□□ 0.75
CCDC40-206ENST00000572083 TECPR1Q7Z6L1 1165 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 GALNT13Q8IUC8 556 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 PGBD5Q8N414 524 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 NUDCD1Q96RS6 583 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 ABCG8Q9H221 673 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 NOD2Q9HC29 1040 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 PLEKHB1Q9UF11 243 aaPredicted RBP19.72■□□□□ 0.75
CCDC40-206ENST00000572083 PRKAB1Q9Y478 270 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 PCYT1BQ9Y5K3 369 aaPredicted RBP19.72■□□□□ 0.75
CCDC40-206ENST00000572083 RPS6KL1Q9Y6S9 549 aa19.72■□□□□ 0.75
CCDC40-206ENST00000572083 MKRN2OSH3BPM6 223 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 PSMA2P25787 234 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 NOP2P46087 812 aaKnown RBP19.71■□□□□ 0.75
CCDC40-206ENST00000572083 COPB1P53618 953 aaKnown RBP19.71■□□□□ 0.75
CCDC40-206ENST00000572083 MAXP61244 160 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 DPTQ07507 201 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 BECN1Q14457 450 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 CRTC2Q53ET0 693 aaPredicted RBP19.71■□□□□ 0.75
CCDC40-206ENST00000572083 ERMARDQ5T6L9 678 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 ADAMTSL4Q6UY14 1074 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 USP45Q70EL2 814 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 ESX1Q8N693 406 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 SCAMP4Q969E2 229 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 AP2M1Q96CW1 435 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 DACH1Q9UI36 760 aa19.71■□□□□ 0.75
CCDC40-206ENST00000572083 INPP4BO15327 924 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 FURINP09958 794 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 DLSTP36957 453 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 UBE2HP62256 183 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 LRP8Q14114 963 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 ERV3-1Q14264 604 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 LRRC66Q68CR7 880 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 TCTN3Q6NUS6 607 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 ASB18Q6ZVZ8 466 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 ARFGAP1Q8N6T3 406 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 SCRN2Q96FV2 425 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 ZNF599Q96NL3 588 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 SMIM14Q96QK8 99 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 MCCC1Q96RQ3 725 aaPredicted RBP19.7■□□□□ 0.74
CCDC40-206ENST00000572083 AGAP2Q99490 1192 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 ULBP3Q9BZM4 244 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 STN1Q9H668 368 aaKnown RBP19.7■□□□□ 0.74
CCDC40-206ENST00000572083 SARS2Q9NP81 518 aaKnown RBP19.7■□□□□ 0.74
CCDC40-206ENST00000572083 CROTQ9UKG9 612 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 PCDHB3Q9Y5E6 796 aa19.7■□□□□ 0.74
CCDC40-206ENST00000572083 EIF3CLB5ME19 914 aaKnown RBP19.69■□□□□ 0.74
CCDC40-206ENST00000572083 ATMINO43313 823 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-206ENST00000572083 AGFG2O95081 481 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 PGLSO95336 258 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 ASMTLO95671 621 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 PEX11BO96011 259 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 ZNF28P17035 718 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 KRT31Q15323 416 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 CYP4V2Q6ZWL3 525 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-206ENST00000572083 CHST15Q7LFX5 561 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-206ENST00000572083 TMEM135Q86UB9 458 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 CCDC13Q8IYE1 715 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 MCOLN2Q8IZK6 566 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 LZTR1Q8N653 840 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 EIF3CQ99613 913 aaKnown RBP19.69■□□□□ 0.74
CCDC40-206ENST00000572083 AGPAT1Q99943 283 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 MGME1Q9BQP7 344 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 TBC1D10AQ9BXI6 508 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 SIDT1Q9NXL6 827 aaKnown RBP19.69■□□□□ 0.74
CCDC40-206ENST00000572083 TBC1D29Q9UFV1 150 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 ZNHIT2Q9UHR6 403 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 SIK3Q9Y2K2 1263 aa19.69■□□□□ 0.74
CCDC40-206ENST00000572083 VPS4BO75351 444 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 GNLYP22749 145 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 HSPA9P38646 679 aaKnown RBP19.68■□□□□ 0.74
CCDC40-206ENST00000572083 FOXM1Q08050 763 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 DPYSQ14117 519 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 MAP7Q14244 749 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 FKBP15Q5T1M5 1219 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 ARMC12Q5T9G4 340 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 CLSTN2Q9H4D0 955 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 PRDM8Q9NQV8 689 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 CWC15Q9P013 229 aaKnown RBP19.68■□□□□ 0.74
CCDC40-206ENST00000572083 VPS4AQ9UN37 437 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 POLHQ9Y253 713 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 KCNK6Q9Y257 313 aa19.68■□□□□ 0.74
CCDC40-206ENST00000572083 OAS3Q9Y6K5 1087 aaKnown RBP19.68■□□□□ 0.74
CCDC40-206ENST00000572083 PRPSAP2O60256 369 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 SNX2O60749 519 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 RFPL1O75677 317 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 ATP1A1P05023 1023 aaKnown RBP19.67■□□□□ 0.74
CCDC40-206ENST00000572083 PDHA1P08559 390 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 EPHA4P54764 986 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 GFERP55789 205 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 CAPRIN2Q6IMN6 1127 aaKnown RBP19.67■□□□□ 0.74
CCDC40-206ENST00000572083 GALNT6Q8NCL4 622 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 PIH1D2Q8WWB5 315 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 COX14Q96I36 57 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 PCMTD1Q96MG8 357 aaPredicted RBP19.67■□□□□ 0.74
CCDC40-206ENST00000572083 TRIM7Q9C029 511 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 ETNK2Q9NVF9 386 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 TAS2R14Q9NYV8 317 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 CNOT8Q9UFF9 292 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms