RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 WASF2Q9Y6W5 498 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 GOLGA8MH3BSY2 632 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 SOCS5O75159 536 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 SIN3BO75182 1162 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 PPFIA2O75334 1257 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
RPAIN-209ENST00000571558 PIGNO95427 931 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 MT-CO3P00414 261 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 CTSLP07711 333 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 CHRNA4P43681 627 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 LMAN1P49257 510 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 CDK18Q07002 472 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 MSLNQ13421 630 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-209ENST00000571558 HLTFQ14527 1009 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPAIN-209ENST00000571558 PCSK7Q16549 785 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 PROX2Q3B8N5 592 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 NAPEPLDQ6IQ20 393 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 CAMK1DQ8IU85 385 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 AGGF1Q8N302 714 aaeCLIP13.75□□□□□ -0.21
RPAIN-209ENST00000571558 FAM181AQ8N9Y4 354 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 ECHDC3Q96DC8 303 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 MED8Q96G25 268 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 FAM129BQ96TA1 746 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 FMO2Q99518 471 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 APOL2Q9BQE5 337 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 HEPHQ9BQS7 1158 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-209ENST00000571558 FOXP3Q9BZS1 431 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 KDM4CQ9H3R0 1056 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 XAB2Q9HCS7 855 aaKnown RBP13.75□□□□□ -0.21
RPAIN-209ENST00000571558 DMTF1Q9Y222 760 aa13.75□□□□□ -0.21
RPAIN-209ENST00000571558 UQCRHLA0A096LP55 91 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 A0A1W2PP55 124 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 CYSRT1A8MQ03 144 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 E7ESA3 106 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 ALOX15BO15296 676 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 AVILO75366 819 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 WISP1O95388 367 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 UQCRHP07919 91 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 PDHA1P08559 390 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 FAM153BP0C7A2 387 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 C5AR1P21730 350 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 SLC8A1P32418 973 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 RECQLP46063 649 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-209ENST00000571558 LSSP48449 732 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 BCL2L1Q07817 233 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 VAC14Q08AM6 782 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 BNIP3Q12983 259 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 GRM3Q14832 879 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 SLC1A5Q15758 541 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 HIF1AQ16665 826 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 FAM153CQ494X1 144 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 MSS51Q4VC12 460 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 SIRPB2Q5JXA9 342 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 KDELC2Q7Z4H8 507 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 STK40Q8N2I9 435 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 OR52K1Q8NGK4 314 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 AENQ8WTP8 325 aaKnown RBP13.74□□□□□ -0.21
RPAIN-209ENST00000571558 ZNF641Q96N77 438 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-209ENST00000571558 WDR83Q9BRX9 315 aaKnown RBP13.74□□□□□ -0.21
RPAIN-209ENST00000571558 FSD1LQ9BXM9 530 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 SERGEFQ9UGK8 458 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 IL36AQ9UHA7 158 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
RPAIN-209ENST00000571558 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 MID1O15344 667 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 BNIP3LO60238 219 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 LEFTY1O75610 366 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 PGLSO95336 258 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 NDST3O95803 873 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ADH1BP00325 375 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 SERPINA4P29622 427 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 SARNPP82979 210 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ELAVL3Q14576 367 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ARHGAP40Q5TG30 622 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 IGF2-ASQ6U949 168 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 GDPD4Q6W3E5 623 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 PPP1R21Q6ZMI0 780 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ZSWIM9Q86XI8 627 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 RELL1Q8IUW5 271 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 RYBPQ8N488 228 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 GRIN3AQ8TCU5 1115 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 KCNE4Q8WWG9 221 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 TTC9Q92623 222 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 DEPDC7Q96QD5 511 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 TXLNGYQ9BZA5 131 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 SUV39H2Q9H5I1 410 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ZDHHC6Q9H6R6 413 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 THSD1Q9NS62 852 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 SARDHQ9UL12 918 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 PPM1HQ9ULR3 514 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 MYLKQ15746 1914 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms