RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 MEI4A8MW99 385 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 AURKAO14965 403 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 MMP20O60882 483 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TM7SF2O76062 418 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RECQL5O94762 991 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PCCBP05166 539 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PYGLP06737 847 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 INHBAP08476 426 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 C1SP09871 688 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 H2AFXP16104 143 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 NMBRP28336 390 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PMLP29590 882 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 SSTR1P30872 391 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 AKT1P31749 480 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 HSD17B3P37058 310 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ETV3P41162 512 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ATP1A2P50993 1020 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 DCDC1P59894 354 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 CACNG1Q06432 222 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 MGAT5Q09328 741 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RALGDSQ12967 914 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 FZD5Q13467 585 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 NAB1Q13506 487 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 GAS6Q14393 721 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 STAT4Q14765 748 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 UAP1Q16222 522 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMEM52BQ4KMG9 183 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 OXLD1Q5BKU9 147 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RNF187Q5TA31 235 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 STEAP4Q687X5 459 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RAET1GQ6H3X3 334 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ESRP1Q6NXG1 681 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 NEK5Q6P3R8 708 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF449Q6P9G9 518 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 CES3Q6UWW8 571 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 LIPIQ6XZB0 460 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC36A4Q6YBV0 504 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 C3orf62Q6ZUJ4 267 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TAS2R42Q7RTR8 314 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PTAR1Q7Z6K3 402 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 SDCCAG8Q86SQ7 713 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMEM135Q86UB9 458 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 C11orf74Q86VG3 221 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TRIM69Q86WT6 500 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 HORMAD1Q86X24 394 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PHYKPLQ8IUZ5 450 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RAVER1Q8IY67 606 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 NRSN1Q8IZ57 195 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 FBXL6Q8N531 539 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 MREGQ8N565 214 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 UHMK1Q8TAS1 419 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 GDAP1Q8TB36 358 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 FBF1Q8TES7 1133 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 HDAC10Q969S8 669 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ULK4Q96C45 1275 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 AP2M1Q96CW1 435 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 DTD2Q96FN9 168 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 SMIM14Q96QK8 99 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 C19orf43Q9BQ61 176 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 WDR83Q9BRX9 315 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TRIM56Q9BRZ2 755 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZSCAN5AQ9BUG6 496 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZCCHC2Q9C0B9 1178 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 CCDC68Q9H2F9 335 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 SEMA4AQ9H3S1 761 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 ACSS3Q9H6R3 686 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PPCSQ9HAB8 311 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 CD248Q9HCU0 757 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 PRMT8Q9NR22 394 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TREX1Q9NSU2 369 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 IL17CQ9P0M4 197 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC2A6Q9UGQ3 507 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 EBF1Q9UH73 591 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 CD84Q9UIB8 345 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 KCTD3Q9Y597 815 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 BRWD1Q9NSI6 2320 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 A0A0U1RQS6 177 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZCWPW2A0A1B0GU75 182 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 UBA6A0AVT1 1052 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 IGLON5A6NGN9 336 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SMIM23A6NLE4 172 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 F8W8V4 182 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 H7C0S8 307 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CCL22O00626 93 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 CAPN5O15484 640 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPINT1O43278 529 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 PI15O43692 258 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 NDUFS3O75489 264 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 SRP72O76094 671 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 FSBPO95073 299 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 GOT2P00505 430 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 IGLV3-19P01714 112 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 MYZAPP0CAP1 466 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 ERVK-10P10266 1014 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 RALBP11234 206 aa6.55□□□□□ -1.36
CTDNEP1-204ENST00000570484 BPIP17213 487 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms