RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PTRH1Q86Y79 214 aaKnown RBP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 GALNT13Q8IUC8 556 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NRSN1Q8IZ57 195 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 IL22RA1Q8N6P7 574 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 LPCAT1Q8NF37 534 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC37A2Q8TED4 501 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 CPLX3Q8WVH0 158 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 SPOCK2Q92563 424 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NKD1Q969G9 470 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 COL26A1Q96A83 441 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 AHCYL2Q96HN2 611 aaKnown RBP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 TAAR9Q96RI9 348 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC38A3Q99624 504 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 CTRCQ99895 268 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 NUP85Q9BW27 656 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 CDH19Q9H159 772 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 ARFGAP3Q9NP61 516 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 STARD5Q9NSY2 213 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 RBM22Q9NW64 420 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC39A1Q9NY26 324 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 KLHL3Q9UH77 587 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNHIT2Q9UHR6 403 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 OAS3Q9Y6K5 1087 aaKnown RBP8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
CTDNEP1-203ENST00000570385 A0A0J9YYE9 177 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 A0A1B0GTH6 734 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 SMTNL1A8MU46 457 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 HGSO14964 777 aaPredicted RBP8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZW10O43264 779 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 FZD6O60353 706 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 SNX2O60749 519 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 CLDN7O95471 211 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 PRLP01236 227 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 TRBC1P01850 177 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 THRAP10827 490 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 ACP5P13686 325 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 LIFP15018 202 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 CD82P27701 267 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 SERPINB6P35237 376 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 GARSP41250 739 aaKnown RBP8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF165P49910 485 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 STC1P52823 247 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 DPTQ07507 201 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 NIPAL4Q0D2K0 466 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 NR1I3Q14994 352 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZNF648Q5T619 568 aaPredicted RBP8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 HGSNATQ68CP4 663 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 NCBP2-AS2Q69YL0 99 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 ADAMTSL4Q6UY14 1074 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 CHST15Q7LFX5 561 aaPredicted RBP8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 UNC5BQ8IZJ1 945 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 NDUFAF2Q8N183 169 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 TEX26Q8N6G2 289 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 AGBL5Q8NDL9 886 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 OR4D9Q8NGE8 314 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 TEKT4Q8WW24 435 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 NCSTNQ92542 709 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 SCARF2Q96GP6 870 aaPredicted RBP8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 FUCA2Q9BTY2 467 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC12A9Q9BXP2 914 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 POLR1EQ9GZS1 481 aaKnown RBP8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 KCTD5Q9NXV2 234 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 IL17BQ9UHF5 180 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 KCNK6Q9Y257 313 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 PPIL1Q9Y3C6 166 aa8.55□□□□□ -1.04
CTDNEP1-203ENST00000570385 A0A087X0T9 212 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 C1orf232A0A0U1RR37 186 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 FADS2P1A8MWK0 482 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 MYO1FO00160 1098 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 NKX2-8O15522 239 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 ARHGAP6O43182 974 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 RAD1O60671 282 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 DNAJC6O75061 913 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 MBD3O95983 291 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 SLC4A1P02730 911 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 HLA-DQB2P05538 268 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 FAM228BP0C875 321 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 PRKAR1AP10644 381 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 TEAD1P28347 426 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 CSRP3P50461 194 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 HHEXQ03014 270 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 GBE1Q04446 702 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 GALNT2Q10471 571 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 TRA2AQ13595 282 aaKnown RBP eCLIP8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 DPYSL3Q14195 570 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 RALGPS1Q5JS13 557 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 COLEC12Q5KU26 742 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 CAVIN1Q6NZI2 390 aaKnown RBP8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 TMEM71Q6P5X7 295 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 ATG14Q6ZNE5 492 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 KDELC2Q7Z4H8 507 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 CACNA2D3Q8IZS8 1091 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 SFRP1Q8N474 314 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 NIPA2Q8N8Q9 360 aa8.54□□□□□ -1.04
CTDNEP1-203ENST00000570385 KCTD6Q8NC69 237 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms