RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 CDH19Q9H159 772 aa10.11□□□□□ -0.79
RPAP1-212ENST00000569829 CARS2Q9HA77 564 aaKnown RBP10.11□□□□□ -0.79
RPAP1-212ENST00000569829 RCOR3Q9P2K3 495 aaPredicted RBP10.11□□□□□ -0.79
RPAP1-212ENST00000569829 TUBD1Q9UJT1 453 aa10.11□□□□□ -0.79
RPAP1-212ENST00000569829 ABCA12Q86UK0 2595 aa10.11□□□□□ -0.79
RPAP1-212ENST00000569829 A0A0U1RQS6 177 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 RHPN2P1A8MT19 583 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 H3BRJ5 948 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 MAFKO60675 156 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 AGFG2O95081 481 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 TPM3P06753 285 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 AMPD1P23109 780 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 MMP12P39900 470 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ARL4AP40617 200 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 RENBPP51606 427 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ARSEP51690 589 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 KIAA1024LP59773 190 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 POLR2LP62875 67 aaKnown RBP10.1□□□□□ -0.79
RPAP1-212ENST00000569829 LACTB2Q53H82 288 aaPredicted RBP10.1□□□□□ -0.79
RPAP1-212ENST00000569829 CCDC122Q5T0U0 273 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 TXNRD3NBQ6F5E7 133 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 SLC30A9Q6PML9 568 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ARHGAP36Q6ZRI8 547 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ZNF438Q7Z4V0 828 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 TP53INP2Q8IXH6 220 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 CBARPQ8N350 705 aaPredicted RBP10.1□□□□□ -0.79
RPAP1-212ENST00000569829 BMPERQ8N8U9 685 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 OR8K1Q8NGG5 319 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 RTP4Q96DX8 246 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 CSPG4P5Q96PW8 444 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 DNAJC7Q99615 494 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 NUP85Q9BW27 656 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ATP13A3Q9H7F0 1226 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 GPN2Q9H9Y4 310 aaPredicted RBP10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ETNK2Q9NVF9 386 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 AKAP7Q9P0M2 348 aaPredicted RBP10.1□□□□□ -0.79
RPAP1-212ENST00000569829 TAAR2Q9P1P5 351 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 ESPL1Q14674 2120 aa10.1□□□□□ -0.79
RPAP1-212ENST00000569829 HIVEP3Q5T1R4 2406 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SHANK1Q9Y566 2161 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 IGHV1OR21-1A0A087WYE8 117 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SSU72P8A0A1W2PR75 194 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 PRSS38A1L453 326 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 DFFAO00273 331 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 CACNB4O00305 520 aaPredicted RBP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 HGSO14964 777 aaPredicted RBP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 HTRA2O43464 458 aaPredicted RBP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 DNAJB5O75953 348 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 EML2O95834 649 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 CCNB1P14635 433 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SERPINA4P29622 427 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 CSTF2P33240 577 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 TRIM23P36406 574 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 HSPA9P38646 679 aaKnown RBP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 GNPDA1P46926 289 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 BCL2L1Q07817 233 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SLC10A7Q0GE19 358 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 KLRB1Q12918 225 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 LBRQ14739 615 aaKnown RBP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 NFKBIBQ15653 356 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SLC18A3Q16572 532 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SMTNL2Q2TAL5 461 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 RALGPS1Q5JS13 557 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 CAPRIN2Q6IMN6 1127 aaKnown RBP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 LIPIQ6XZB0 460 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 AGBL5Q8NDL9 886 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 GPBAR1Q8TDU6 330 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 STARD8Q92502 1023 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 PCDH18Q9HCL0 1135 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPAP1-212ENST00000569829 UVRAGQ9P2Y5 699 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 LCMT1Q9UIC8 334 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 ANAPC7Q9UJX3 599 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SUFUQ9UMX1 484 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 SRPK3Q9UPE1 567 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 ATP8A1Q9Y2Q0 1164 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 PPIL1Q9Y3C6 166 aa10.09□□□□□ -0.79
RPAP1-212ENST00000569829 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 ZFHX3Q15911 3703 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.08□□□□□ -0.8
RPAP1-212ENST00000569829 A0A1W2PQ67 120 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 CEACAM5P06731 702 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 HOXC4P09017 264 aaPredicted RBP10.08□□□□□ -0.8
RPAP1-212ENST00000569829 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 ZNF28P17035 718 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 SCNN1BP51168 640 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 AP1S1P61966 158 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 CTBSQ01459 385 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 TRIM14Q14142 442 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 NR1D2Q14995 579 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 HADHQ16836 314 aaKnown RBP10.08□□□□□ -0.8
RPAP1-212ENST00000569829 DENND2CQ68D51 928 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 ERAP2Q6P179 960 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 PNCKQ6P2M8 343 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 RFLNAQ6ZTI6 216 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 ATCAYQ86WG3 371 aa10.08□□□□□ -0.8
RPAP1-212ENST00000569829 NLGN4XQ8N0W4 816 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms