RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ABCA7Q8IZY2 2146 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 AGGF1Q8N302 714 aaeCLIP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 MFSD2AQ8NA29 543 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 GSDMBQ8TAX9 411 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 ZNF398Q8TD17 642 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 MFSD3Q96ES6 412 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 SERAC1Q96JX3 654 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 RIOK2Q9BVS4 552 aaKnown RBP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 PARD6BQ9BYG5 372 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 BPIFA1Q9NP55 256 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 RAB23Q9ULC3 237 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 COQ6Q9Y2Z9 468 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 KCTD3Q9Y597 815 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 PLXNA2O75051 1894 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 ZCWPW2A0A1B0GU75 182 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 CTIFO43310 598 aaKnown RBP23.33■■□□□ 1.33
RAB40C-212ENST00000569575 SLC4A1P02730 911 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 NMBRP28336 390 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 GPR1P46091 355 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 RABIFP47224 123 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 CRYMQ14894 314 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 KYAT3Q6YP21 454 aaKnown RBP23.33■■□□□ 1.33
RAB40C-212ENST00000569575 ABI3BPQ7Z7G0 1075 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 GPR150Q8NGU9 434 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 OR4L1Q8NH43 312 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 HDAC10Q969S8 669 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 ZNF669Q96BR6 464 aaPredicted RBP23.33■■□□□ 1.33
RAB40C-212ENST00000569575 TBATAQ96M53 351 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 PWWP2AQ96N64 755 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 TCF12Q99081 682 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 ORAI3Q9BRQ5 295 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 SPATA16Q9BXB7 569 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 FKBPLQ9UIM3 349 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 CHMP2BQ9UQN3 213 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 VPS9D1Q9Y2B5 631 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 PCDHGA5Q9Y5G8 931 aa23.33■■□□□ 1.33
RAB40C-212ENST00000569575 A6NNZ2 444 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 GPR89AB7ZAQ6 455 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 PRAMEF1O95521 474 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 GPR89BP0CG08 455 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 KELP23276 732 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 PHBP35232 272 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 NFATC2Q13469 925 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 IRF4Q15306 451 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 PEAR1Q5VY43 1037 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-212ENST00000569575 RAET1GQ6H3X3 334 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 MRNIPQ6NTE8 343 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 SDCCAG8Q86SQ7 713 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-212ENST00000569575 RGL4Q8IZJ4 473 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 MYRIPQ8NFW9 859 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 OR6P1Q8NGX9 317 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 CEP76Q8TAP6 659 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 SNX19Q92543 992 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 SCAMP4Q969E2 229 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 ZNF778Q96MU6 729 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 TEX101Q9BY14 249 aa23.32■■□□□ 1.32
RAB40C-212ENST00000569575 PHPT1Q9NRX4 125 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-212ENST00000569575 EIF2B4Q9UI10 523 aaKnown RBP23.32■■□□□ 1.32
RAB40C-212ENST00000569575 MYLKQ15746 1914 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 TRBV5-4A0A0C4DH59 114 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 A0A0U1RQS6 177 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 BUD23O43709 281 aaKnown RBP23.31■■□□□ 1.32
RAB40C-212ENST00000569575 VAPBO95292 243 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 MC4RP32245 332 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 ARCN1P48444 511 aaKnown RBP23.31■■□□□ 1.32
RAB40C-212ENST00000569575 DHPSP49366 369 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-212ENST00000569575 VSNL1P62760 191 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 PEX6Q13608 980 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 PTK2BQ14289 1009 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 TEAD4Q15561 434 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 FASTKD1Q53R41 847 aaKnown RBP23.31■■□□□ 1.32
RAB40C-212ENST00000569575 LDLRAP1Q5SW96 308 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 UNC5AQ6ZN44 842 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 C3orf62Q6ZUJ4 267 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 SYT12Q8IV01 421 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 C1orf216Q8TAB5 229 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 BTN2A2Q8WVV5 523 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 FAM167BQ9BTA0 163 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 ASB8Q9H765 288 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 EBF2Q9HAK2 575 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 NSMCE4AQ9NXX6 385 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 MOCS1Q9NZB8 636 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 CD84Q9UIB8 345 aa23.31■■□□□ 1.32
RAB40C-212ENST00000569575 A0A1B0GTW7 788 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 CCDC162PA2VCL2 907 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 F8W8V4 182 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 CACNB4O00305 520 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 BCAT2O15382 392 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 OGNP20774 298 aaKnown RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 HTR1BP28222 390 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 CD38P28907 300 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 TTPAP49638 278 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 AFF3P51826 1226 aaKnown RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 PFN3P60673 137 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 TCF15Q12870 199 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 THOC5Q13769 683 aaKnown RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 INPP5AQ14642 412 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 CHRNA6Q15825 494 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 FAM151BQ6UXP7 276 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 ANKMY2Q8IV38 441 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms