RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ZNF235Q14590 738 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 SYCP1Q15431 976 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 DCUN1D2Q6PH85 259 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 ARHGAP36Q6ZRI8 547 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 RFX8Q6ZV50 586 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 MARK2Q7KZI7 788 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 NPWQ8N729 165 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 ZNF599Q96NL3 588 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 MCCC1Q96RQ3 725 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 VPS16Q9H269 839 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 EPB41L1Q9H4G0 881 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 DHX35Q9H5Z1 703 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 CUEDC1Q9NWM3 386 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 SIDT1Q9NXL6 827 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 KLHL3Q9UH77 587 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 CROTQ9UKG9 612 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 ITPR2Q14571 2701 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 TTLL8A6PVC2 850 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 INPP4BO15327 924 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 EML2O95834 649 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 PYGLP06737 847 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 ANKRD34CP0C6C1 535 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 ERCC2P18074 760 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 MAPK9P45984 424 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 JAM2P57087 298 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 ERV3-1Q14264 604 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 C6orf15Q6UXA7 325 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 TECPR1Q7Z6L1 1165 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 SLC9B2Q86UD5 537 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 TSPAN33Q86UF1 283 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 PLXDC1Q8IUK5 500 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 CPT1CQ8TCG5 803 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 FNIP1Q8TF40 1166 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 AP2M1Q96CW1 435 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 NUDCD1Q96RS6 583 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 MGME1Q9BQP7 344 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 HERPUD2Q9BSE4 406 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 NOD2Q9HC29 1040 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 FAM207AQ9NSI2 230 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 SEPT11Q9NVA2 429 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 CD84Q9UIB8 345 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 KCND3Q9UK17 655 aa11.71□□□□□ -0.53
GTF3C1-209ENST00000568569 MN1Q10571 1320 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 PGLSO95336 258 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 FURINP09958 794 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 SLC2A4P14672 509 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 ZNF28P17035 718 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 TNFAIP3P21580 790 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 EEF1GP26641 437 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 OGDHQ02218 1023 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 FOXM1Q08050 763 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 TRAF2Q12933 501 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 CA9Q16790 459 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 TCP11X2Q5H9J9 407 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 RALGPS1Q5JS13 557 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 ARMC12Q5T9G4 340 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 LRRC66Q68CR7 880 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 IYDQ6PHW0 289 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 ZNF765Q7L2R6 523 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 NLRP8Q86W28 1048 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 BBS5Q8N3I7 341 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 AVL9Q8NBF6 648 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 COX14Q96I36 57 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 KCTD15Q96SI1 283 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 SNRNP25Q9BV90 132 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 ABCG8Q9H221 673 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 NLRC4Q9NPP4 1024 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 CNOT8Q9UFF9 292 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 ZNHIT2Q9UHR6 403 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 TLK1Q9UKI8 766 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 CENPEQ02224 2701 aa11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 TEP1Q99973 2627 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-209ENST00000568569 KIR2DS5A0A0G2JLQ3 304 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 A0A0G2JNG1 304 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 CDC14CA4D256 554 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 A6NCN8 305 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 LILRA5A6NI73 299 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 KIR2DS3K7RE56 304 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 KATNA1O75449 491 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 ASMTLO95671 621 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 RECKO95980 971 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 PDGFAP04085 211 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 CTPS1P17812 591 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 GARSP41250 739 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 KLK7P49862 253 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 ZNF135P52742 658 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 KIR2DS5Q14953 304 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 PTPRRQ15256 657 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 DPCR1Q3MIW9 517 aa11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-209ENST00000568569 ERMARDQ5T6L9 678 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms