RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 TBC1D3FA6NER0 549 aaPredicted RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3LB9A6J9 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 GJB3O75712 270 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 ANP32DO95626 131 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 IGLV3-27P01718 113 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3HP0C7X1 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 DNAJB1P25685 340 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 CRHR1P34998 444 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 ELP6Q0PNE2 266 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 PFKFB4Q16877 469 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 RALGPS1Q5JS13 557 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3GQ6DHY5 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3CQ6IPX1 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 CERS6Q6ZMG9 384 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 SERPINA9Q86WD7 417 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3Q8IZP1 549 aaPredicted RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 ZNF276Q8N554 614 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 RNF148Q8N7C7 305 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 AP2M1Q96CW1 435 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC2A11Q9BYW1 496 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 DNAJC13O75165 2243 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TTC34A8MYJ7 566 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 H2AFYO75367 372 aaKnown RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 CUL3Q13618 768 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 QPCTQ16769 361 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC5A9Q2M3M2 681 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC44A2Q8IWA5 706 aaPredicted RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 STAG3L4Q8TBR4 150 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MYLIPQ8WY64 445 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 ELMO1Q92556 727 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 LRGUKQ96M69 825 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MGME1Q9BQP7 344 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 NOL6Q9H6R4 1146 aaKnown RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 CNOT1A5YKK6 2376 aaKnown RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 PGLSO95336 258 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 DGKAP23743 735 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 HLA-FP30511 346 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 RGRP47804 291 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 BST1Q10588 318 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 LYPLAL1Q5VWZ2 237 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 ISLR2Q6UXK2 745 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 TMEM135Q86UB9 458 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 BANPQ8N9N5 519 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 RAB3IPQ96QF0 476 aaPredicted RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 GPR21Q99679 349 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 ECT2Q9H8V3 914 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 CACNA2D2Q9NY47 1150 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 HEY2Q9UBP5 337 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 BAG5Q9UL15 447 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 SRCP12931 536 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MAGEA6P43360 314 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 ARF5P84085 180 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 DUSP6Q16828 381 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 BRAT1Q6PJG6 821 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 GPSM1Q86YR5 675 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 C10orf107Q8IVU9 208 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 DCBLD1Q8N8Z6 715 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MTG2Q9H4K7 406 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 TDRD15B5MCY1 1934 aaKnown RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 EP300Q09472 2414 aaPredicted RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 TRBV23OR9-2A0A075B6M9 112 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 LEFTY1O75610 366 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 PDE1CQ14123 709 aaPredicted RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 OR14C36Q8NHC7 312 aa12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 MRPL57Q9BQC6 102 aaKnown RBP12.1□□□□□ -0.47
TMEM170A-205ENST00000568559 CLNS1AP54105 237 aaKnown RBP12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 SCIMPQ6UWF3 145 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 LINGO1Q96FE5 620 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 EPB41L4BQ9H329 900 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 ZNF358Q9NW07 568 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 MOCS1Q9NZB8 636 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 TMEM216Q9P0N5 145 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 THSD7BQ9C0I4 1608 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 RIF1Q5UIP0 2472 aaKnown RBP12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 TRIM24O15164 1050 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 GSTA4O15217 222 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 RAD51BO15315 384 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 KAT7O95251 611 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 CORO7P57737 925 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 LRRC66Q68CR7 880 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 NCEH1Q6PIU2 408 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 KDELC1Q6UW63 502 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 ZC3HC1Q86WB0 502 aaKnown RBP12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 NPAS3Q8IXF0 933 aa12.09□□□□□ -0.47
TMEM170A-205ENST00000568559 WFDC5Q8TCV5 224 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms