RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 HIPK1Q86Z02 1210 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ARMC8Q8IUR7 673 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 AQP12AQ8IXF9 295 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 SUN5Q8TC36 379 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 NEURL2Q9BR09 285 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 CHCHD6Q9BRQ6 235 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 LATS2Q9NRM7 1088 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 MAP3K20Q9NYL2 800 aaKnown RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 ZNF221Q9UK13 617 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 PPP6CO00743 305 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 WNT10BO00744 389 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ZNF195O14628 629 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 NCAM2O15394 837 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 AQP9O43315 295 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 KPNA6O60684 536 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 PLA2G6O60733 806 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ANXA6P08133 673 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ABCB1P08183 1280 aaPredicted RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 ILF2Q12905 390 aaKnown RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 DAG1Q14118 895 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ZNF235Q14590 738 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 SPCS2Q15005 226 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 FSCN1Q16658 493 aaKnown RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 NDUFA5Q16718 116 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 SLC25A52Q3SY17 297 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 HECTD2Q5U5R9 776 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 METTL7BQ6UX53 244 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 AMER2Q8N7J2 671 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 OR2T12Q8NG77 320 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 CNIH3Q8TBE1 160 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 SGCDQ92629 289 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 SMAD5Q99717 465 aaKnown RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.87□□□□□ -0.67
PALB2-206ENST00000568219 MPP6Q9NZW5 540 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ZNF99A8MXY4 864 aaPredicted RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 ENDOD1O94919 500 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 DIRAS1O95057 198 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 CHRM5P08912 532 aaPredicted RBP10.87□□□□□ -0.67
PALB2-206ENST00000568219 MYF6P23409 242 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 CD86P42081 329 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ARSFP54793 590 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ZRANB3Q5FWF4 1079 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 HMBOX1Q6NT76 420 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 MRNIPQ6NTE8 343 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 NEK5Q6P3R8 708 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 HASPINQ8TF76 798 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 OSMRQ99650 979 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ACTR8Q9H981 624 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ACTR3BQ9P1U1 418 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 IPPQ9Y573 584 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 KIF13AQ9H1H9 1805 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 KRT87PA6NCN2 255 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 FAM72CH0Y354 149 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 BCKDKO14874 412 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ABCB7O75027 752 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 PGK1P00558 417 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 AGXTP21549 392 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 KCNA5P22460 613 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 NPTX1Q15818 432 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 FAM72AQ5TYM5 149 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 FAM72DQ6L9T8 149 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 FAM72BQ86X60 149 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ADHFE1Q8IWW8 467 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 CADM3Q8N126 398 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 SH3YL1Q96HL8 342 aaPredicted RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 HSFY1Q96LI6 401 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ZNF560Q96MR9 790 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 CDK15Q96Q40 435 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 RANBP9Q96S59 729 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 GPR22Q99680 433 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ERAP1Q9NZ08 941 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ZNHIT2Q9UHR6 403 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 USP22Q9UPT9 525 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 TNFSF13BQ9Y275 285 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 TCRBV5S1A1TA0A578 114 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 LOC110117498-PIK3R3F6TDL0 507 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ZBTB7AO95365 584 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 CDH1P12830 882 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 CD36P16671 472 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 TAF6P49848 677 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 HLCSP50747 726 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 UFM1P61960 85 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 FAM214AQ32MH5 1076 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ELMSAN1Q6PJG2 1045 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ZDHHC17Q8IUH5 632 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 PDPRQ8NCN5 879 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 ROPN1LQ96C74 230 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 NSUN5Q96P11 429 aaKnown RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 MUC3BQ9H195 1237 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 TP63Q9H3D4 680 aaPredicted RBP10.86□□□□□ -0.67
PALB2-206ENST00000568219 NEK6Q9HC98 313 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 MAGEE1Q9HCI5 957 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 PKP3Q9Y446 797 aa10.86□□□□□ -0.67
PALB2-206ENST00000568219 PCDHGA3Q9Y5H0 932 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms