RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 GPBAR1Q8TDU6 330 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 LMX1AQ8TE12 382 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 ALS2CR12Q96Q35 445 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 SRPK1Q96SB4 655 aaKnown RBP12.22□□□□□ -0.45
FANCA-229ENST00000567988 TMEM121Q9BTD3 319 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 CDH19Q9H159 772 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 TRABDQ9H4I3 376 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 PHPT1Q9NRX4 125 aaPredicted RBP12.22□□□□□ -0.45
FANCA-229ENST00000567988 IL17CQ9P0M4 197 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 SHOC2Q9UQ13 582 aa12.22□□□□□ -0.45
FANCA-229ENST00000567988 PTPRBP23467 1997 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 PLXNB3Q9ULL4 1909 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 GOLGA4Q13439 2230 aaKnown RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 EME2A4GXA9 379 aaPredicted RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 GOLGA6L9A6NEM1 432 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 F5H423 210 aaPredicted RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 PDE2AO00408 941 aaPredicted RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 DNAJC6O75061 913 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 RFPL3O75679 317 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 ANXA9O76027 345 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 AGTP01019 485 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 GP1BAP07359 652 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 KCNA4P22459 653 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 PSMA3P25788 255 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 POLD2P49005 469 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 GEMP55040 296 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 ELOCQ15369 112 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 PARP6Q2NL67 630 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 PDPK2PQ6A1A2 396 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 HID1Q8IV36 788 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 IPMKQ8NFU5 416 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 CCL4L1Q8NHW4 92 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 HIC2Q96JB3 615 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 PLEKHG4BQ96PX9 1271 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 C19orf43Q9BQ61 176 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 SLC13A1Q9BZW2 595 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 TMEM168Q9H0V1 697 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 FAM83DQ9H4H8 585 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 TRNAU1APQ9NX07 287 aaKnown RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 PKD2L2Q9NZM6 624 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 VPS18Q9P253 973 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 TTC7AQ9ULT0 858 aaPredicted RBP12.21□□□□□ -0.45
FANCA-229ENST00000567988 SUFUQ9UMX1 484 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 MSRB2Q9Y3D2 182 aa12.21□□□□□ -0.45
FANCA-229ENST00000567988 ITPR1Q14643 2758 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 ANKRD11Q6UB99 2663 aaPredicted RBP12.2□□□□□ -0.46
FANCA-229ENST00000567988 DSPP15924 2871 aaKnown RBP12.2□□□□□ -0.46
FANCA-229ENST00000567988 NOBOXO60393 691 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 TNFP01375 233 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 ALPPL2P10696 532 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 CDK4P11802 303 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 MYF5P13349 255 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 CA5AP35218 305 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 GPR1P46091 355 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 CCNG2Q16589 344 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 P3H1Q32P28 736 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 PYCR3Q53H96 274 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 SEL1L2Q5TEA6 688 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 FAXCQ5TGI0 409 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 CDCP2Q5VXM1 449 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 TRIM74Q86UV6 250 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 TRAM1L1Q8N609 369 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 GLIS1Q8NBF1 620 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 CCHCR1Q8TD31 782 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 VPS35Q96QK1 796 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 ZSCAN5AQ9BUG6 496 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 FICDQ9BVA6 458 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 IL26Q9NPH9 171 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 HACD3Q9P035 362 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 AAR2Q9Y312 384 aaKnown RBP12.2□□□□□ -0.46
FANCA-229ENST00000567988 JRKLQ9Y4A0 524 aa12.2□□□□□ -0.46
FANCA-229ENST00000567988 ZNF106Q9H2Y7 1883 aaKnown RBP12.2□□□□□ -0.46
FANCA-229ENST00000567988 TDRD6O60522 2096 aaKnown RBP12.2□□□□□ -0.46
FANCA-229ENST00000567988 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 USP27XA6NNY8 438 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 CHUKO15111 745 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 NRDCO43847 1150 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 SUN1O94901 812 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 AP2A1O95782 977 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 STIP1P31948 543 aaKnown RBP12.19□□□□□ -0.46
FANCA-229ENST00000567988 INSM1Q01101 510 aaPredicted RBP12.19□□□□□ -0.46
FANCA-229ENST00000567988 KHDC1Q4VXA5 237 aaKnown RBP12.19□□□□□ -0.46
FANCA-229ENST00000567988 GUSBP11Q6P575 273 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 SLC25A41Q8N5S1 370 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 ARL10Q8N8L6 244 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 KYQ8NBH2 561 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 C1orf54Q8WWF1 131 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 PPP1R2P1Q96PQ5 205 aa12.19□□□□□ -0.46
FANCA-229ENST00000567988 CARS2Q9HA77 564 aaKnown RBP12.19□□□□□ -0.46
FANCA-229ENST00000567988 CYP4F12Q9HCS2 524 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms