RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.58□□□□□ -0.08
COMMD4-221ENST00000567935 NSMCE3Q96MG7 304 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 ZNF641Q96N77 438 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-221ENST00000567935 OMDQ99983 421 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 TM6SF2Q9BZW4 377 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 CAB39LQ9H9S4 337 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 SLC2A4RGQ9NR83 387 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 CLEC4EQ9ULY5 219 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 SLC8A2Q9UPR5 921 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 VWA7Q9Y334 891 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 PKP3Q9Y446 797 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 ZNF711Q9Y462 761 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 KCTD3Q9Y597 815 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 PCDHB9Q9Y5E1 797 aa14.58□□□□□ -0.08
COMMD4-221ENST00000567935 KANSL1LA0AUZ9 987 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 CCDC189A1A4V9 331 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 TRAFD1O14545 582 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 ZIC2O95409 532 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 POP4O95707 220 aaKnown RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 PRKCGP05129 697 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 MYL2P10916 166 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 RALBP11234 206 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 FGF3P11487 239 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 CD9P21926 228 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 NFKBIAP25963 317 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 HMGCLP35914 325 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 PPARGP37231 505 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 NNMTP40261 264 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 ABCG1P45844 678 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 TTPAP49638 278 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 SUOXP51687 545 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 ECT2LQ008S8 904 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 DLG2Q15700 870 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 MYLK3Q32MK0 819 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 HECTD2Q5U5R9 776 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 C16orf46Q6P387 395 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 ZYG11AQ6WRX3 759 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 CERS6Q6ZMG9 384 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 PLD6Q8N2A8 252 aaKnown RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 STK40Q8N2I9 435 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 MDGA1Q8NFP4 955 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 RIN3Q8TB24 985 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 PDCD6IPQ8WUM4 868 aaKnown RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 OSCP1Q8WVF1 389 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 C10orf82Q8WW14 230 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 PIH1D2Q8WWB5 315 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 NXPE3Q969Y0 559 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 CCDC126Q96EE4 140 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 LYSMD1Q96S90 227 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 MRPL57Q9BQC6 102 aaKnown RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 MECRQ9BV79 373 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 MRPL46Q9H2W6 279 aaKnown RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 STN1Q9H668 368 aaKnown RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 KCNK4Q9NYG8 393 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 GDE1Q9NZC3 331 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-221ENST00000567935 FBXO10Q9UK96 956 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 DOCK8Q8NF50 2099 aa14.57□□□□□ -0.08
COMMD4-221ENST00000567935 A0A0J9YYE9 177 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 WASH3PC4AMC7 463 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 K7ERQ8 282 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 PHGDHO43175 533 aaKnown RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 SMAD6O43541 496 aaKnown RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 TRIM13O60858 407 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 NDUFS3O75489 264 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 NFATC1O95644 943 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 TRBC1P01850 177 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 RBP1P09455 135 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 LTA4HP09960 611 aaKnown RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 PIRTP0C851 137 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 POLR2EP19388 210 aaKnown RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 FSHRP23945 695 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 SERPINB5P36952 375 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 RECQLP46063 649 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 NUMBP49757 651 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 HK2P52789 917 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 ADARP55265 1226 aaKnown RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 UBXN2BQ14CS0 331 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 CARD16Q5EG05 197 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 LRRC8EQ6NSJ5 796 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 UNQ6494/PRO21346Q6UXR6 183 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 PRR23CQ6ZRP0 262 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 CENPLQ8N0S6 344 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 OR6Y1Q8NGX8 325 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 SMARCD2Q92925 531 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 ECHDC3Q96DC8 303 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 ZSWIM3Q96MP5 696 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 TTC1Q99614 292 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 GPR63Q9BZJ6 419 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 CCDC68Q9H2F9 335 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 TRPV4Q9HBA0 871 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 NPHS2Q9NP85 383 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 SEMA4GQ9NTN9 838 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 POLR3BQ9NW08 1133 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 IL17CQ9P0M4 197 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 MARCH4Q9P2E8 410 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 RUVBL2Q9Y230 463 aaKnown RBP14.56□□□□□ -0.08
COMMD4-221ENST00000567935 PPIL1Q9Y3C6 166 aa14.56□□□□□ -0.08
COMMD4-221ENST00000567935 MYOFQ9NZM1 2061 aa14.55□□□□□ -0.08
COMMD4-221ENST00000567935 CAPN8A6NHC0 703 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms