RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KCTD16Q68DU8 428 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 TSPAN33Q86UF1 283 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 NRROSQ86YC3 692 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 CCNYQ8ND76 341 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 USP7Q93009 1102 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 TDRD1Q9BXT4 1180 aaKnown RBP18.51■□□□□ 0.55
LINC01238-205ENST00000567549 ABCG8Q9H221 673 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 RDH14Q9HBH5 336 aa18.51■□□□□ 0.55
LINC01238-205ENST00000567549 DUX1O43812 170 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 ITIH1P19827 911 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 AK4P27144 223 aaPredicted RBP18.5■□□□□ 0.55
LINC01238-205ENST00000567549 FASLGP48023 281 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 STC1P52823 247 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 LIMK2P53671 638 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 OR1D5P58170 312 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 KIAA1614Q5VZ46 1190 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 NCBP2-AS2Q69YL0 99 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 NAGSQ8N159 534 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 PELI3Q8N2H9 469 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.5■□□□□ 0.55
LINC01238-205ENST00000567549 HDAC11Q96DB2 347 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 TEFMQ96QE5 360 aaKnown RBP18.5■□□□□ 0.55
LINC01238-205ENST00000567549 LYSMD1Q96S90 227 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 SRPK1Q96SB4 655 aaKnown RBP18.5■□□□□ 0.55
LINC01238-205ENST00000567549 SLC38A3Q99624 504 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.5■□□□□ 0.55
LINC01238-205ENST00000567549 FAM117AQ9C073 453 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 TSPY26PQ9H489 355 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 EPB41L1Q9H4G0 881 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 CBX8Q9HC52 389 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 PCDH9Q9HC56 1237 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 PCDHGA3Q9Y5H0 932 aa18.5■□□□□ 0.55
LINC01238-205ENST00000567549 ZNF487B1APH4 448 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 GPR89AB7ZAQ6 455 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 EFSO43281 561 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 B4GAT1O43505 415 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 PDHA1P08559 390 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 GPR89BP0CG08 455 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 PBX1P40424 430 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 PTSQ03393 145 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 LY6DQ14210 128 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 PYCR3Q53H96 274 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 TXNRD3NBQ6F5E7 133 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 NYAP1Q6ZVC0 841 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 VSIG1Q86XK7 387 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 CCDC13Q8IYE1 715 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 NSMCE3Q96MG7 304 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 HERPUD2Q9BSE4 406 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 FUCA2Q9BTY2 467 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 DDA1Q9BW61 102 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 MAK16Q9BXY0 300 aaKnown RBP18.49■□□□□ 0.55
LINC01238-205ENST00000567549 SEMA6CQ9H3T2 930 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 ZNHIT2Q9UHR6 403 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 CD84Q9UIB8 345 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 CHKBQ9Y259 395 aa18.49■□□□□ 0.55
LINC01238-205ENST00000567549 HELZ2Q9BYK8 2649 aaKnown RBP18.49■□□□□ 0.55
LINC01238-205ENST00000567549 ZFC3H1O60293 1989 aaKnown RBP18.48■□□□□ 0.55
LINC01238-205ENST00000567549 IGHV5-10-1A0A0J9YXX1 117 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 C1orf232A0A0U1RR37 186 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 OR5K4A6NMS3 321 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 CAPN5O15484 640 aaPredicted RBP18.48■□□□□ 0.55
LINC01238-205ENST00000567549 CBFA2T2O43439 604 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 ZFXP17010 805 aaPredicted RBP18.48■□□□□ 0.55
LINC01238-205ENST00000567549 IL4RP24394 825 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 CD1CP29017 333 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 POLD2P49005 469 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 DSC2Q02487 901 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 MMRN1Q13201 1228 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 CCDC70Q6NSX1 233 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 TMEM71Q6P5X7 295 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 SLC9B2Q86UD5 537 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 PHYKPLQ8IUZ5 450 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 LPCAT1Q8NF37 534 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 CCDC74BQ96LY2 380 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 ZPBPQ9BS86 351 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 EFHD1Q9BUP0 239 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 MLPHQ9BV36 600 aaPredicted RBP18.48■□□□□ 0.55
LINC01238-205ENST00000567549 RIOK2Q9BVS4 552 aaKnown RBP18.48■□□□□ 0.55
LINC01238-205ENST00000567549 BRD8Q9H0E9 1235 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 FAM83DQ9H4H8 585 aa18.48■□□□□ 0.55
LINC01238-205ENST00000567549 IGHV1OR21-1A0A087WYE8 117 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 PPP1R12AO14974 1030 aaPredicted RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 CASC3O15234 703 aaKnown RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 HNRNPH3P31942 346 aaKnown RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 DEKP35659 375 aaKnown RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 TNNT3P45378 269 aaPredicted RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 ARSEP51690 589 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 EPHA4P54764 986 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 HHEXQ03014 270 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 C16orf72Q14CZ0 275 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 SLC18A3Q16572 532 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 DCAF12Q5T6F0 453 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 MARK2Q7KZI7 788 aaKnown RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 BZW1Q7L1Q6 419 aaKnown RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 DTX1Q86Y01 620 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 SFRP1Q8N474 314 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 SCAMP4Q969E2 229 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms