RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 C1orf232A0A0U1RR37 186 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 ERVH48-1M5A8F1 160 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 KCNK1O00180 336 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 APOL1O14791 398 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 CLDN7O95471 211 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 ECEL1O95672 775 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 CPNE6O95741 557 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 ACTR1BP42025 376 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 CD86P42081 329 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 GPR3P46089 330 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 ACTR1AP61163 376 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 RHDQ02161 417 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 VAC14Q08AM6 782 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 LRP8Q14114 963 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 PDK1Q15118 436 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 MAP9Q49MG5 647 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 ARHGAP40Q5TG30 622 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 PIM3Q86V86 326 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 JAMLQ86YT9 394 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 GALNT13Q8IUC8 556 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 CNGA4Q8IV77 575 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 SLITRK4Q8IW52 837 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 CCHCR1Q8TD31 782 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 SNRNP27Q8WVK2 155 aaKnown RBP20.06■□□□□ 0.8
CLN6-207ENST00000566347 COX14Q96I36 57 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 CMKLR1Q99788 373 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 MLPHQ9BV36 600 aaPredicted RBP20.06■□□□□ 0.8
CLN6-207ENST00000566347 RIOK2Q9BVS4 552 aaKnown RBP20.06■□□□□ 0.8
CLN6-207ENST00000566347 ACSL6Q9UKU0 697 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 TMEM98Q9Y2Y6 226 aa20.06■□□□□ 0.8
CLN6-207ENST00000566347 SCN8AQ9UQD0 1980 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 RGSL1A5PLK6 1076 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 C3orf70A6NLC5 250 aaPredicted RBP20.05■□□□□ 0.8
CLN6-207ENST00000566347 ANKRD66B4E2M5 251 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 PPP1R12AO14974 1030 aaPredicted RBP20.05■□□□□ 0.8
CLN6-207ENST00000566347 MMP2P08253 660 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 ALDH4A1P30038 563 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 SLC5A2P31639 672 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 SLC1A1P43005 524 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 AP1B1Q10567 949 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 QPCTQ16769 361 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 PYCR3Q53H96 274 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 TRIM74Q86UV6 250 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 NAGSQ8N159 534 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 AGAP2Q99490 1192 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 BRD8Q9H0E9 1235 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 DDX56Q9NY93 547 aaKnown RBP20.05■□□□□ 0.8
CLN6-207ENST00000566347 PKD2L2Q9NZM6 624 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 AKAP7Q9P0M2 348 aaPredicted RBP20.05■□□□□ 0.8
CLN6-207ENST00000566347 VPS18Q9P253 973 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 PISDQ9UG56 409 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 INTUQ9ULD6 942 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 ST14Q9Y5Y6 855 aa20.05■□□□□ 0.8
CLN6-207ENST00000566347 AHCTF1Q8WYP5 2266 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 NVLO15381 856 aaKnown RBP20.04■□□□□ 0.8
CLN6-207ENST00000566347 B4GAT1O43505 415 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 KRT1P04264 644 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 HGFP14210 728 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 SPINT3P49223 89 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 OR1D5P58170 312 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 ZBTB17Q13105 803 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 CLN3Q13286 438 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 AMZ1Q400G9 498 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 PHF19Q5T6S3 580 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 MARK2Q7KZI7 788 aaKnown RBP20.04■□□□□ 0.8
CLN6-207ENST00000566347 RHOT1Q8IXI2 618 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 CNTD1Q8N815 330 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 FAM83DQ9H4H8 585 aa20.04■□□□□ 0.8
CLN6-207ENST00000566347 ZFC3H1O60293 1989 aaKnown RBP20.03■□□□□ 0.8
CLN6-207ENST00000566347 INPP4BO15327 924 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 ASMTLO95671 621 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 C19orf57Q0VDD7 668 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 TCEAL1Q15170 157 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 HENMT1Q5T8I9 393 aaKnown RBP20.03■□□□□ 0.8
CLN6-207ENST00000566347 RFX6Q8HWS3 928 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 RNF214Q8ND24 703 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 WBP1Q96G27 269 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 OLFM3Q96PB7 478 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 RMI1Q9H9A7 625 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 RDH14Q9HBH5 336 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 PLEKHM1Q9Y4G2 1056 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 ATMQ13315 3056 aa20.03■□□□□ 0.8
CLN6-207ENST00000566347 AKR1B15C9JRZ8 316 aaPredicted RBP20.02■□□□□ 0.8
CLN6-207ENST00000566347 K7ENP7 123 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 INO80CQ6PI98 192 aaPredicted RBP20.02■□□□□ 0.8
CLN6-207ENST00000566347 CCDC81Q6ZN84 652 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 TMPRSS9Q7Z410 1059 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 NT5DC3Q86UY8 548 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 PATE1Q8WXA2 126 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 IMP4Q96G21 291 aaKnown RBP20.02■□□□□ 0.8
CLN6-207ENST00000566347 CCNL2Q96S94 520 aaPredicted RBP20.02■□□□□ 0.8
CLN6-207ENST00000566347 DPYSL5Q9BPU6 564 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 SLC25A51Q9H1U9 297 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 SEMA6CQ9H3T2 930 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 ZNHIT2Q9UHR6 403 aa20.02■□□□□ 0.8
CLN6-207ENST00000566347 HGSO14964 777 aaPredicted RBP20.01■□□□□ 0.79
CLN6-207ENST00000566347 SPOPO43791 374 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 CD1CP29017 333 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 FASLGP48023 281 aa20.01■□□□□ 0.79
CLN6-207ENST00000566347 SQSTM1Q13501 440 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms