RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 MPSTP25325 297 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SERPINB6P35237 376 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 ACTR1BP42025 376 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 FASLGP48023 281 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 ACTR1AP61163 376 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 DSC2Q02487 901 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 ITKQ08881 620 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NIPAL4Q0D2K0 466 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SLC10A2Q12908 348 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NFATC3Q12968 1075 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 TRA2AQ13595 282 aaKnown RBP eCLIP8.53□□□□□ -1.04
CAPN3-213ENST00000565173 DPYSL3Q14195 570 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 TMEM164Q5U3C3 297 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NCBP2-AS2Q69YL0 99 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 DOK6Q6PKX4 331 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 RAVER1Q8IY67 606 aaKnown RBP8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SFRP1Q8N474 314 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 BMPERQ8N8U9 685 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SLC37A2Q8TED4 501 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 LRRN4Q8WUT4 740 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NSMCE1Q8WV22 266 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 JPH3Q8WXH2 748 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NKD1Q969G9 470 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 TSGA13Q96PP4 275 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 OR2M4Q96R27 311 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 LYSMD1Q96S90 227 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SLC12A9Q9BXP2 914 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SPRY4Q9C004 299 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 POLR1EQ9GZS1 481 aaKnown RBP8.53□□□□□ -1.04
CAPN3-213ENST00000565173 GOLGA6AQ9NYA3 693 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 NENFQ9UMX5 172 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 CHKBQ9Y259 395 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 PCDHB11Q9Y5F2 797 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 B3GALT1Q9Y5Z6 326 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 OAS3Q9Y6K5 1087 aaKnown RBP8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SDK2Q58EX2 2172 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 TRBV23OR9-2A0A075B6M9 112 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 B4E171 279 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 STMND1H3BQB6 276 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 MYO1FO00160 1098 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 ZW10O43264 779 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 SUV39H1O43463 412 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 DNAJC6O75061 913 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 WISP1O95388 367 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CLDN7O95471 211 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 SERPINC1P01008 464 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 SERPING1P05155 500 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 HLA-DQB2P05538 268 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 MMP2P08253 660 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CES1P23141 567 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 UGT1A3P35503 534 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 TSPAN7P41732 249 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 TAS2R40P59535 323 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 GPLD1P80108 840 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 NFKB2Q00653 900 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 KCNC4Q03721 635 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 PEX6Q13608 980 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 KRT81Q14533 505 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CLCA4Q14CN2 919 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 ANKRD20A8PQ5CZ79 823 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CCDC122Q5T0U0 273 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 TMEM71Q6P5X7 295 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 ALKBH5Q6P6C2 394 aaKnown RBP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 IYDQ6PHW0 289 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 MARK2Q7KZI7 788 aaKnown RBP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 NDUFAF2Q8N183 169 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 PQLC3Q8N755 202 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 AGBL5Q8NDL9 886 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 EXD1Q8NHP7 514 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 FAF2Q96CS3 445 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 EID2BQ96D98 161 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 RIOK2Q9BVS4 552 aaKnown RBP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 TDRD1Q9BXT4 1180 aaKnown RBP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CDH19Q9H159 772 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CLMPQ9H6B4 373 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 RBM22Q9NW64 420 aaKnown RBP eCLIP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 OCIAD1Q9NX40 245 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 KCNK4Q9NYG8 393 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 AKAP7Q9P0M2 348 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-213ENST00000565173 TBC1D29Q9UFV1 150 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 AMACRQ9UHK6 382 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 CAPN11Q9UMQ6 739 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 PRKAB1Q9Y478 270 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 HECTD1Q9ULT8 2610 aa8.52□□□□□ -1.05
CAPN3-213ENST00000565173 A6NCN8 305 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 CYSRT1A8MQ03 144 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 FADS2P1A8MWK0 482 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ANKRD66B4E2M5 251 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 INPP4BO15327 924 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ATP1A1P05023 1023 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 PYGLP06737 847 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 CSTF2P33240 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 SPINT3P49223 89 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 RPL26P61254 145 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ZBED6P86452 979 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms