RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 STX16-NPEPL1H3BU86 382 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 GNGT2O14610 69 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PDE5AO76074 875 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C1RP00736 705 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 JCHAINP01591 159 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 BLKP51451 505 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 WDR4P57081 412 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 RPS24P62847 133 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 MPP1Q00013 466 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MSLNQ13421 630 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 ERAP2Q6P179 960 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RHBDF2Q6PJF5 856 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ICA1LQ8NDH6 482 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SLC35F5Q8WV83 523 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 EBNA1BP2Q99848 306 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 RTP3Q9BQQ7 232 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SERHL2Q9H4I8 314 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 VPS45Q9NRW7 570 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DTLQ9NZJ0 730 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PAK5Q9P286 719 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGC4Q9Y5F7 938 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TBKBP1A7MCY6 615 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 EPN2O95208 641 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MT-ND1P03886 318 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ENO1P06733 434 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 HNRNPLP14866 589 aaKnown RBP eCLIP3.35□□□□□ -1.871e-6■■■■□ 22.6
CHD9-213ENST00000564845 CD72P21854 359 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PTGER1P34995 402 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CASP2P42575 452 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SOX9P48436 509 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DLG1Q12959 904 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PPM1LQ5SGD2 360 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ANO7Q6IWH7 933 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 R3HCC1LQ7Z5L2 792 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 C12orf56Q8IXR9 622 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RBFAQ8N0V3 343 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MIER2Q8N344 545 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TCAIMQ8N3R3 496 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 S100ZQ8WXG8 99 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ARSGQ96EG1 525 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CAPNS2Q96L46 248 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PRDM12Q9H4Q4 367 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ANKHQ9HCJ1 492 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 VTA1Q9NP79 307 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PSMC3IPQ9P2W1 217 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 NFKBIL1Q9UBC1 381 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 TCRBV9S1A1TA0A576 114 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PRMT5O14744 637 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CASC3O15234 703 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 SLITRK5O94991 958 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PRAMEF12O95522 483 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PIM1P11309 404 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CSF2RAP15509 400 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PTPN1P18031 435 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 FGFR3P22607 806 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ALDH7A1P49419 539 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CDH13P55290 713 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RAB14P61106 215 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 NSUN2Q08J23 767 aaKnown RBP eCLIP3.35□□□□□ -1.87
CHD9-213ENST00000564845 TSTA3Q13630 321 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 KRT33BQ14525 404 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 KLHL12Q53G59 568 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CEP78Q5JTW2 689 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 AGBL2Q5U5Z8 902 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TMEM198Q66K66 360 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 EIF5AL1Q6IS14 154 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 RPL13AP3Q6NVV1 102 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C6orf89Q6UWU4 347 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RASGEF1CQ8N431 466 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C12orf50Q8NA57 414 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 ZFP28Q8NHY6 868 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 WFDC5Q8TCV5 224 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 IFT43Q96FT9 208 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SFXN2Q96NB2 322 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 WDCPQ9H6R7 721 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PNPLA8Q9NP80 782 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TNFRSF12AQ9NP84 129 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 STARD7Q9NQZ5 370 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TMEM216Q9P0N5 145 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RAPGEFL1Q9UHV5 662 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SBF1O95248 1867 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 A0A1B0GTL3 188 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TMX2-CTNND1H3BSU7 103 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 B3GALT4O96024 378 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PDHA1P08559 390 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 OCM2P0CE71 109 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 OCMP0CE72 109 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 HRH2P25021 359 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ACVRL1P37023 503 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PSMB10P40306 273 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 RNF144AP50876 292 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 NTHL1P78549 312 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ROR1Q01973 937 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DDI2Q5TDH0 399 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 OTUD1Q5VV17 481 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 CDK20Q8IZL9 346 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PPHLN1Q8NEY8 458 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 FAM45AQ8TCE6 357 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TMEM190Q8WZ59 177 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms